RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 MYO1CO00159 1063 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 EIF3FO00303 357 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 PCDH17O14917 1159 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 RAD51CO43502 376 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 KLHL18O94889 574 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 KCNK10P57789 538 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 ARG2P78540 354 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 CKAP4Q07065 602 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 Q0VFX4 171 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 GRM7Q14831 915 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZC3H12BQ5HYM0 836 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 TCTE1Q5JU00 501 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZNF324BQ6AW86 544 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 GALNT7Q86SF2 657 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 CPNE9Q8IYJ1 553 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 FBXO36Q8NEA4 188 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 OR9A1PQ8NGU1 263 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 ITLN2Q8WWU7 325 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 C16orf45Q96MC5 204 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 ERP44Q9BS26 406 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 TAS2R13Q9NYV9 303 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 WHRNQ9P202 907 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 CTSFQ9UBX1 484 aa18.28■□□□□ 0.52
TRAPPC3-204ENST00000373166 DYTNA2CJ06 578 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZNF839A8K0R7 811 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 TP73O15350 636 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 HPP00738 406 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 MCM3P25205 808 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 HSD17B2P37059 387 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 RGS4P49798 205 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 FRG1Q14331 258 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 NAA25Q14CX7 972 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 FAM214AQ32MH5 1076 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZBED8Q8IZ13 594 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 NR4A3Q92570 626 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 CRB3Q9BUF7 120 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 RAB17Q9H0T7 212 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 PLAC1Q9HBJ0 212 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZFATQ9P243 1243 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 SLC17A6Q9P2U8 582 aa18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 CORO1CQ9ULV4 474 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 UTP11Q9Y3A2 253 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-204ENST00000373166 FER1L5A0AVI2 2057 aa18.27■□□□□ 0.51
TRAPPC3-204ENST00000373166 VSTM2BA6NLU5 285 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 E7ESA3 106 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 SYF2O95926 243 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 AHSGP02765 367 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 ERGP11308 486 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 PSMB5P28074 263 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 GABRB3P28472 473 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 SKIV2L2P42285 1042 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 OR1D4P47884 311 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 TDGF1P3P51864 188 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 ARHGAP19Q14CB8 494 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 INAQ16352 499 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 RBM20Q5T481 1227 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 TEDDM1Q5T9Z0 273 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 MTFR2Q6P444 385 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 TRMT10BQ6PF06 316 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 GFRALQ6UXV0 394 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 KBTBD2Q8IY47 623 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 GPATCH11Q8N954 259 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 TTC29Q8NA56 475 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 FBXO15Q8NCQ5 510 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 ASB11Q8WXH4 323 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 SMPDL3AQ92484 453 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 LURAP1Q96LR2 239 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 MIPEPQ99797 713 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF160Q9HCG1 818 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 C2CD3Q4AC94 2353 aa18.26■□□□□ 0.51
TRAPPC3-204ENST00000373166 AKAP9Q99996 3911 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 SNRNP200O75643 2136 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 CELSR1Q9NYQ6 3014 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 TRAV17A0A0B4J275 112 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 TRGV8A0A0C4DH27 118 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZBTB14O43829 449 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 PRICKLE3O43900 615 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 COX6B1P14854 86 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 ACPPP15309 386 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 HTR1EP28566 365 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 RPA3P35244 121 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 GRIA3P42263 894 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 MGAT5Q09328 741 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 TSTA3Q13630 321 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 FASTKD3Q14CZ7 662 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 FIGLAQ6QHK4 219 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 TMEM207Q6UWW9 146 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 BNC2Q6ZN30 1099 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 UBE2R2Q712K3 238 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF572Q7Z3I7 529 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 PIWIL4Q7Z3Z4 852 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 MRGPRGQ86SM5 289 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 MYO1HQ8N1T3 1032 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF808Q8N4W9 903 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 OR2L3Q8NG85 312 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 TAAR6Q96RI8 345 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 PKP4Q99569 1192 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 SELENOSQ9BQE4 189 aa18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 ENAMQ9NRM1 1142 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms