RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 DNAJC14Q6Y2X3 702 aaPredicted RBP24.07■■□□□ 1.44
CTSA-203ENST00000372459 MSRB3Q8IXL7 192 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 TMEM132CQ8N3T6 1108 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 FERD3LQ96RJ6 166 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 PCBD2Q9H0N5 130 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 SERHLQ9NQF3 203 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 DMRT3Q9NQL9 472 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 USP22Q9UPT9 525 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 MAPRE3Q9UPY8 281 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 AURKCQ9UQB9 309 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 GPSM3Q9Y4H4 160 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 PCM1Q15154 2024 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 TRBV5-3A0A0A0MS03 114 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 AKAP10O43572 662 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 SH3BGRLO75368 114 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 RAE1P78406 368 aaKnown RBP24.07■■□□□ 1.44
CTSA-203ENST00000372459 TBCELQ5QJ74 424 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 TMEM92Q6UXU6 159 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 C17orf64Q86WR6 236 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 TICAM1Q8IUC6 712 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 KRT78Q8N1N4 520 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 SMPDL3AQ92484 453 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 PPWD1Q96BP3 646 aaKnown RBP24.07■■□□□ 1.44
CTSA-203ENST00000372459 INSM2Q96T92 566 aaPredicted RBP24.07■■□□□ 1.44
CTSA-203ENST00000372459 MENTQ9BUN1 341 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 TSC22D4Q9Y3Q8 395 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 PCDHB14Q9Y5E9 798 aa24.07■■□□□ 1.44
CTSA-203ENST00000372459 HNRNPRO43390 633 aaKnown RBP24.06■■□□□ 1.44
CTSA-203ENST00000372459 ANXA4P09525 319 aaPredicted RBP24.06■■□□□ 1.44
CTSA-203ENST00000372459 ZCCHC18P0CG32 403 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 UMPSP11172 480 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 COX7A2P14406 83 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 NDUFV2P19404 249 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 SOX11P35716 441 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 HNRNPFP52597 415 aaKnown RBP24.06■■□□□ 1.44
CTSA-203ENST00000372459 MEF2AQ02078 507 aaPredicted RBP24.06■■□□□ 1.44
CTSA-203ENST00000372459 SF1Q15637 639 aaKnown RBP24.06■■□□□ 1.44
CTSA-203ENST00000372459 CYP51A1Q16850 503 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 UGT8Q16880 541 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 GLYATQ6IB77 296 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 OR4F3Q6IEY1 312 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 DUS1LQ6P1R4 473 aaKnown RBP24.06■■□□□ 1.44
CTSA-203ENST00000372459 ST13P4Q8IZP2 240 aaPredicted RBP24.06■■□□□ 1.44
CTSA-203ENST00000372459 GPR156Q8NFN8 814 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 TNIP2Q8NFZ5 429 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 SH3KBP1Q96B97 665 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 ZNF583Q96ND8 569 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 SPNS1Q9H2V7 528 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 TAC3Q9UHF0 121 aa24.06■■□□□ 1.44
CTSA-203ENST00000372459 TCRBV5S2A0A599 114 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 LATO43561 262 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 HOXC4P09017 264 aaPredicted RBP24.05■■□□□ 1.44
CTSA-203ENST00000372459 IDSP22304 550 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 HRH2P25021 359 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 TIA1P31483 386 aaKnown RBP eCLIP24.05■■□□□ 1.444e-8■□□□□ 8
CTSA-203ENST00000372459 PIK3CBP42338 1070 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 LPCAT2Q7L5N7 544 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 ADGRG5Q8IZF4 528 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 DENND6BQ8NEG7 585 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 OR2T12Q8NG77 320 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 CDC26Q8NHZ8 85 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 NELL1Q92832 810 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 SCARF2Q96GP6 870 aaPredicted RBP24.05■■□□□ 1.44
CTSA-203ENST00000372459 ACAT2Q9BWD1 397 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 SIRT5Q9NXA8 310 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 ENO4A6NNW6 628 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 RFXANKO14593 260 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 TIPRLO75663 272 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 GALNT18Q6P9A2 607 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 TMIGD1Q6UXZ0 262 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 ERMP1Q7Z2K6 904 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 ANKRD46Q86W74 232 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 FAM129CQ86XR2 697 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 OR7A2PQ8NGA2 310 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 OR8J2Q8NGG1 315 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 OR10A6Q8NH74 314 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 FAM3CQ92520 227 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 EME1Q96AY2 570 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 MSANTD3Q96H12 275 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 NSMCE2Q96MF7 247 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 REXO4Q9GZR2 422 aaKnown RBP24.05■■□□□ 1.44
CTSA-203ENST00000372459 SEMA6AQ9H2E6 1030 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 PRO3102Q9H379 93 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 PELI2Q9HAT8 420 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 MMP17Q9ULZ9 603 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 INVSQ9Y283 1065 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 CROCCQ5TZA2 2017 aa24.05■■□□□ 1.44
CTSA-203ENST00000372459 TMEM265A0A087WTH1 108 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 TCRBV21S2A2A0A5A6 115 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 PRR19A6NJB7 356 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 PCDH7O60245 1069 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 GMNNO75496 209 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 KIAA1024LP59773 190 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 SMAD4Q13485 552 aaKnown RBP24.04■■□□□ 1.44
CTSA-203ENST00000372459 MLF2Q15773 248 aaPredicted RBP24.04■■□□□ 1.44
CTSA-203ENST00000372459 GTDC1Q4AE62 458 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 SLC30A9Q6PML9 568 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 TRIM69Q86WT6 500 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 CCDC115Q96NT0 180 aa24.04■■□□□ 1.44
CTSA-203ENST00000372459 INPP5KQ9BT40 448 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms