RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CPSF6Q16630 551 aaKnown RBP eCLIP13.62□□□□□ -0.23
LDB3-204ENST00000372066 TMTC4Q5T4D3 741 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 C10orf62Q5T681 223 aaPredicted RBP13.62□□□□□ -0.23
LDB3-204ENST00000372066 FRG2Q64ET8 278 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 ZBTB49Q6ZSB9 765 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 SLC22A15Q8IZD6 547 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 STARD8Q92502 1023 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 GTF2H4Q92759 462 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 ZNF514Q96K75 400 aaPredicted RBP13.62□□□□□ -0.23
LDB3-204ENST00000372066 FCRL1Q96LA6 429 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 FRG2BQ96QU4 278 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 CD93Q9NPY3 652 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 FARSBQ9NSD9 589 aaKnown RBP13.62□□□□□ -0.23
LDB3-204ENST00000372066 KLK13Q9UKR3 277 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 MAN2B2Q9Y2E5 1009 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 NEUROG3Q9Y4Z2 214 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 STON1Q9Y6Q2 735 aa13.62□□□□□ -0.23
LDB3-204ENST00000372066 FRYQ5TBA9 3013 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 CHD6Q8TD26 2715 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 KPNA3O00505 521 aaPredicted RBP13.61□□□□□ -0.23
LDB3-204ENST00000372066 BCKDHAP12694 445 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 CDH1P12830 882 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 CD59P13987 128 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 GNSP15586 552 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 MAOBP27338 520 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 POLE2P56282 527 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 PFN3P60673 137 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 TMEM115Q12893 351 aaPredicted RBP13.61□□□□□ -0.23
LDB3-204ENST00000372066 STARD3Q14849 445 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 PTGR1Q14914 329 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 ADRM1Q16186 407 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 FAM174BQ3ZCQ3 159 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
LDB3-204ENST00000372066 NEK5Q6P3R8 708 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 DSG4Q86SJ6 1040 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 IFNEQ86WN2 208 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 CHERPQ8IWX8 916 aaKnown RBP13.61□□□□□ -0.23
LDB3-204ENST00000372066 GALNT4Q8N4A0 578 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 RASGEF1AQ8N9B8 481 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 ZCCHC14Q8WYQ9 949 aaKnown RBP13.61□□□□□ -0.23
LDB3-204ENST00000372066 FOXJ1Q92949 421 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 SEMA6AQ9H2E6 1030 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 EPB41L1Q9H4G0 881 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 GPRC5BQ9NZH0 403 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 GMPR2Q9P2T1 348 aaKnown RBP13.61□□□□□ -0.23
LDB3-204ENST00000372066 MSRB2Q9Y3D2 182 aa13.61□□□□□ -0.23
LDB3-204ENST00000372066 CACNA1GO43497 2377 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 OR2AG2A6NM03 316 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 ARHGEF33A8MVX0 844 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 CLGNO14967 610 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 TSPAN6O43657 245 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 MTX2O75431 263 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 ANXA6P08133 673 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 GGT1P19440 569 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 CD6P30203 668 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 HALP42357 657 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 CCT8P50990 548 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 DGKQP52824 942 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 IRF8Q02556 426 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 DPTQ07507 201 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 CYP4F3Q08477 520 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 CHIT1Q13231 466 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 ATP6AP1Q15904 470 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 TMEM52BQ4KMG9 183 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 SGO1Q5FBB7 561 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 WDR45BQ5MNZ6 344 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 LRIF1Q5T3J3 769 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 ATG9BQ674R7 924 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 GLYATQ6IB77 296 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 GRHL2Q6ISB3 625 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 SUSD1Q6UWL2 747 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 AMIGO2Q86SJ2 522 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 RAB7BQ96AH8 199 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 NUS1Q96E22 293 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 PPM1MQ96MI6 270 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 TMEM74Q96NL1 305 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 MRPS26Q9BYN8 205 aaKnown RBP13.6□□□□□ -0.23
LDB3-204ENST00000372066 GORASP2Q9H8Y8 452 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 BRF2Q9HAW0 419 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 DNAAF2Q9NVR5 837 aaKnown RBP13.6□□□□□ -0.23
LDB3-204ENST00000372066 SUSD2Q9UGT4 822 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 SLC22A14Q9Y267 594 aa13.6□□□□□ -0.23
LDB3-204ENST00000372066 ASCC3Q8N3C0 2202 aaKnown RBP13.6□□□□□ -0.23
LDB3-204ENST00000372066 A0A096LPI6 279 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 SMIM31A0A1B0GVY4 71 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 C1QTNF3-AMACRE9PGA6 284 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 H0YIV9 168 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 AREL1O15033 823 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 SH3BP5O60239 455 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 HRH2P25021 359 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 S100A3P33764 101 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 C21orf58P58505 322 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 GTF2H3Q13889 308 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 E2F2Q14209 437 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 ZXDCQ2QGD7 858 aaPredicted RBP13.59□□□□□ -0.23
LDB3-204ENST00000372066 RUNDC3AQ59EK9 446 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 SPANXN4Q5MJ08 99 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 C6orf52Q5T4I8 152 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 C9orf64Q5T6V5 341 aa13.59□□□□□ -0.23
LDB3-204ENST00000372066 AGTRAPQ6RW13 159 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms