RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 INPP4BO15327 924 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 PRPF4O43172 522 aaKnown RBP eCLIP3.47□□□□□ -1.85
MCF2-202ENST00000370573 TM7SF2O76062 418 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SEC24DO94855 1032 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 INMTO95050 263 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 MT-ND5P03915 603 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ACADMP11310 421 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 NEFHP12036 1026 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CHN1P15882 459 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 FAHP16930 419 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ATP5DP30049 168 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ADSLP30566 484 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 MAT2AP31153 395 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 GALNSP34059 522 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CRHR1P34998 444 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 HOXD12P35452 270 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SERPINB8P50452 374 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CTSCP53634 463 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ADARP55265 1226 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 RAB10P61026 200 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 RPS21P63220 83 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 CCDC15Q0P6D6 951 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ITGA9Q13797 1035 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ITIH4Q14624 930 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 IRF4Q15306 451 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TTC31Q49AM3 519 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 AARS2Q5JTZ9 985 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 LYPLAL1Q5VWZ2 237 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TTC19Q6DKK2 380 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 PNCKQ6P2M8 343 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 NAPRTQ6XQN6 538 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 MACC1Q6ZN28 852 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TAOK1Q7L7X3 1001 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ADGRG6Q86SQ4 1221 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TRIM74Q86UV6 250 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 KBTBD6Q86V97 674 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ZNF761Q86XN6 746 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 CENPLQ8N0S6 344 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 RBFAQ8N0V3 343 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 LINC00482Q8N8I6 264 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 RASGEF1AQ8N9B8 481 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 KYQ8NBH2 561 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SIDT2Q8NBJ9 832 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 DDHD1Q8NEL9 900 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TSTD1Q8NFU3 115 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 GABPB2Q8TAK5 448 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 ACMSDQ8TDX5 336 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 KCTD4Q8WVF5 259 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 EDAQ92838 391 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 GLYATL1Q969I3 302 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.47□□□□□ -1.85
MCF2-202ENST00000370573 ULK4Q96C45 1275 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 NXNL1Q96CM4 212 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 NMD3Q96D46 503 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 SGF29Q96ES7 293 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 COX14Q96I36 57 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 APOPT1Q96IL0 206 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 LENG8Q96PV6 779 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 VPS35Q96QK1 796 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SMC6Q96SB8 1091 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 COPS8Q99627 209 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 GPR21Q99679 349 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SELENOSQ9BQE4 189 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ZSCAN5AQ9BUG6 496 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 BDH2Q9BUT1 245 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SLC17A9Q9BYT1 436 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TPSD1Q9BZJ3 242 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CLPBQ9H078 707 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 C6orf106Q9H6K1 298 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 PREBQ9HCU5 417 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 MLXIPLQ9NP71 852 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SMOXQ9NWM0 555 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 WSB2Q9NYS7 404 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 TMEM216Q9P0N5 145 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SENP1Q9P0U3 644 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 IKZF3Q9UKT9 509 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 RUVBL2Q9Y230 463 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 CA5BQ9Y2D0 317 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 PLLPQ9Y342 182 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 PCYT1BQ9Y5K3 369 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 PIKFYVEQ9Y2I7 2098 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 GON4LQ3T8J9 2241 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 A0A0A6YYJ9 748 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 IGHV1OR15-9A0A0B4J2B8 117 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SYNDIG1LA6NDD5 238 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 VGLL3A8MV65 326 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 H3BMM5 538 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SLC31A1O15431 190 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ASNA1O43681 348 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 PLIN3O60664 434 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 RHOBTB1O94844 696 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SLC25A14O95258 325 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 APBB3O95704 486 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SEMA4FO95754 770 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TSPAN12O95859 305 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 PCCBP05166 539 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 IGHV4-34P06331 123 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SBK3P0C264 359 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ATP1B2P14415 290 aaPredicted RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 STMN1P16949 149 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms