RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 IMP4Q96G21 291 aaKnown RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 DEPDC7Q96QD5 511 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 PITHD1Q9GZP4 211 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 REV1Q9UBZ9 1251 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 DRG1Q9Y295 367 aaKnown RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CAB39Q9Y376 341 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 PMF1-BGLAPU3KQ54 211 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CMYA5Q8N3K9 4069 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 A0A1W2PQ72 361 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 PATE3B3GLJ2 98 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 CAPN5O15484 640 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 AVILO75366 819 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 CCNKO75909 580 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 RHOBTB1O94844 696 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 CAPN1P07384 714 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 ITGA2P17301 1181 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 ITPKAP23677 461 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 HMGCLP35914 325 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 RPS5P46782 204 aaKnown RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 HOXA1P49639 335 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 MPP1Q00013 466 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 PDK2Q15119 407 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 ANKRD22Q5VYY1 191 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 KDM4DQ6B0I6 523 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 MACC1Q6ZN28 852 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 MAVSQ7Z434 540 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 KDELC2Q7Z4H8 507 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 SLCO6A1Q86UG4 719 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 DYNC2LI1Q8TCX1 351 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 SLC47A1Q96FL8 570 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 WDCPQ9H6R7 721 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 KLK4Q9Y5K2 254 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 MED19A0JLT2 244 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 HMX3A6NHT5 357 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF98A6NK75 572 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 H0Y626 953 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 H0YAE9 185 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 LAMTOR5O43504 91 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 MAN1A2O60476 641 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 PDGFAP04085 211 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 CYP2A7P20853 494 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 IGFALSP35858 605 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 KRT20P35900 424 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 MPLP40238 635 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 RECQLP46063 649 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 TIAL1Q01085 375 aaKnown RBP eCLIP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 SCRN3Q0VDG4 424 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 CCNYL2Q5T2Q4 361 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 HENMT1Q5T8I9 393 aaKnown RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 ABRAXAS1Q6UWZ7 409 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 CDKL3Q8IVW4 592 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 OR4M2Q8NGB6 313 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 PMM1Q92871 262 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 PAFAH2Q99487 392 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 LGMNQ99538 433 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 ZDHHC5Q9C0B5 715 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 MRPL40Q9NQ50 206 aaKnown RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 C20orf96Q9NUD7 363 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 INTS7Q9NVH2 962 aaKnown RBP6.65□□□□□ -1.34
CSDE1-204ENST00000369530 GLTPQ9NZD2 209 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 SLC17A4Q9Y2C5 497 aa6.65□□□□□ -1.34
CSDE1-204ENST00000369530 SDK2Q58EX2 2172 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 MROH6A6NGR9 719 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 CENPXA8MT69 81 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 SOCS5O75159 536 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 BPGMP07738 259 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 ITGB6P18564 788 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 GARSP41250 739 aaKnown RBP6.65□□□□□ -1.35
CSDE1-204ENST00000369530 ADARB1P78563 741 aaKnown RBP6.65□□□□□ -1.35
CSDE1-204ENST00000369530 ITKQ08881 620 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 GPR50Q13585 617 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 FLOT2Q14254 428 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 PERM1Q5SV97 790 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 TEDDM1Q5T9Z0 273 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 TTC33Q6PID6 262 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-204ENST00000369530 TIFABQ6ZNK6 161 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 TMPRSS7Q7RTY8 843 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 GPAT4Q86UL3 456 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 TAGAPQ8N103 731 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 EID3Q8N140 333 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 SVOPQ8N4V2 548 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 DTX3Q8N9I9 347 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 ADAMTS14Q8WXS8 1223 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 LPGAT1Q92604 370 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 PTP4A1Q93096 173 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 CELF6Q96J87 481 aaKnown RBP6.65□□□□□ -1.35
CSDE1-204ENST00000369530 WDR83Q9BRX9 315 aaKnown RBP6.65□□□□□ -1.35
CSDE1-204ENST00000369530 NIPAL2Q9H841 368 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 IL21RQ9HBE5 538 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 CYP4F12Q9HCS2 524 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 MRPL39Q9NYK5 338 aaKnown RBP6.65□□□□□ -1.35
CSDE1-204ENST00000369530 MPP6Q9NZW5 540 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 ENOPH1Q9UHY7 261 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 DSPP15924 2871 aaKnown RBP6.65□□□□□ -1.35
CSDE1-204ENST00000369530 TRPM6Q9BX84 2022 aa6.65□□□□□ -1.35
CSDE1-204ENST00000369530 IGSF10Q6WRI0 2623 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SAC3D1A6NKF1 404 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 HNRNPCL2B2RXH8 293 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 H7C0S8 307 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 DFFAO00273 331 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms