RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 PTPN6P29350 595 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 S100A3P33764 101 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 CTAG1AP78358 180 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 EIF4EBP2Q13542 120 aaPredicted RBP15.68■□□□□ 0.1
CHD1L-203ENST00000369259 ZBTB37Q5TC79 503 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 EIF3MQ7L2H7 374 aaKnown RBP15.68■□□□□ 0.1
CHD1L-203ENST00000369259 SERPINA11Q86U17 422 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 ANKRD46Q86W74 232 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 CARNMT1Q8N4J0 409 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 OR8H1Q8NGG4 311 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 GPR152Q8TDT2 470 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 IPPKQ9H8X2 491 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 ASIC5Q9NY37 505 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 AUP1Q9Y679 476 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 CFAP20Q9Y6A4 193 aaKnown RBP15.68■□□□□ 0.1
CHD1L-203ENST00000369259 E9PAM4 449 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 LGALS2P05162 132 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 PIRTP0C851 137 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 ENPP1P22413 925 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 CDKN2CP42773 168 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 SMARCB1Q12824 385 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 SLC14A1Q13336 389 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 GPR162Q16538 588 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 NOTUMQ6P988 496 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 CBLL1Q75N03 491 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 SH3KBP1Q96B97 665 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 LRTM1Q9HBL6 345 aa15.68■□□□□ 0.1
CHD1L-203ENST00000369259 MICAL3Q7RTP6 2002 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 FABP12A6NFH5 140 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 SMLR1H3BR10 107 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 AGRPO00253 132 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 SLC22A5O76082 557 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 EPN2O95208 641 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 FGF1P05230 155 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 VMACQ2NL98 169 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.67■□□□□ 0.19e-8■■□□□ 14.4
CHD1L-203ENST00000369259 IQCCQ4KMZ1 466 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 SLC39A12Q504Y0 691 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 USP39Q53GS9 565 aaKnown RBP15.67■□□□□ 0.1
CHD1L-203ENST00000369259 GDPGP1Q6ZNW5 385 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 LPCAT1Q8NF37 534 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 HMCESQ96FZ2 354 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 FEVQ99581 238 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 CCM2Q9BSQ5 444 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 RETREG1Q9H6L5 497 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 TRIM45Q9H8W5 580 aaPredicted RBP15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ABCB9Q9NP78 766 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 RIMKLBQ9ULI2 386 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 PCDHGB3Q9Y5G1 929 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 PCDHGA2Q9Y5H1 932 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 KCNE2Q9Y6J6 123 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 FFAR3O14843 346 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 GPR42O15529 346 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 NIPSNAP2O75323 286 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ADRA2AP08913 450 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 KCNE1P15382 129 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ATF4P18848 351 aaPredicted RBP15.67■□□□□ 0.1
CHD1L-203ENST00000369259 HLA-DPA1P20036 260 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 HOXD10P28358 340 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 GPC1P35052 558 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 PIK3CGP48736 1102 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ATN1P54259 1190 aaPredicted RBP15.67■□□□□ 0.1
CHD1L-203ENST00000369259 PCDH1Q08174 1060 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 MAB21L1Q13394 359 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 LARS2Q15031 903 aaKnown RBP15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ERICH5Q6P6B1 374 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 LHFPL5Q8TAF8 219 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 FATE1Q969F0 183 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 EMID1Q96A84 441 aaPredicted RBP15.67■□□□□ 0.1
CHD1L-203ENST00000369259 OPALINQ96PE5 141 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 DCLRE1CQ96SD1 692 aaKnown RBP15.67■□□□□ 0.1
CHD1L-203ENST00000369259 SPATA9Q9BWV2 254 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 KCNN2Q9H2S1 579 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ZNF408Q9H9D4 720 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 COQ3Q9NZJ6 369 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ZNF451Q9Y4E5 1061 aa15.67■□□□□ 0.1
CHD1L-203ENST00000369259 ANKRD36A6QL64 1941 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 SLC10A3P09131 477 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 BCKDHAP12694 445 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 PKMP14618 531 aaKnown RBP15.66■□□□□ 0.1
CHD1L-203ENST00000369259 TALDO1P37837 337 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 TGM4P49221 684 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 DOC2BQ14184 412 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 MFSD13AQ14CX5 517 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 LCN1P1Q5VSP4 162 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 NADSYN1Q6IA69 706 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 PDE12Q6L8Q7 609 aaKnown RBP15.66■□□□□ 0.1
CHD1L-203ENST00000369259 RGMBQ6NW40 437 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 MSANTD2Q6P1R3 559 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 FAM124AQ86V42 546 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 WDR36Q8NI36 951 aaKnown RBP15.66■□□□□ 0.1
CHD1L-203ENST00000369259 CD200R1Q8TD46 325 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 UTP15Q8TED0 518 aaKnown RBP15.66■□□□□ 0.1
CHD1L-203ENST00000369259 CHTF18Q8WVB6 975 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 MAGEB10Q96LZ2 347 aaPredicted RBP15.66■□□□□ 0.1
CHD1L-203ENST00000369259 HYLS1Q96M11 299 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 HHATLQ9HCP6 504 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 FARSBQ9NSD9 589 aaKnown RBP15.66■□□□□ 0.1
CHD1L-203ENST00000369259 IMPAD1Q9NX62 359 aa15.66■□□□□ 0.1
CHD1L-203ENST00000369259 DUSP12Q9UNI6 340 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms