RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 ZNF30P17039 623 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 MNX1P50219 401 aaPredicted RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 RFX4Q33E94 735 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 GALNT18Q6P9A2 607 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 HOMEZQ8IX15 550 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 GIPC3Q8TF64 312 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 MAGED4Q96JG8 741 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 TOX2Q96NM4 488 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 SAMD11Q96NU1 681 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 SH3BP4Q9P0V3 963 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 CHD7Q9P2D1 2997 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 BCAS1O75363 584 aaPredicted RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 INHBBP09529 407 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 POLR2EP19388 210 aaKnown RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 RYKP34925 604 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 MAP2K4P45985 399 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 GP2P55259 537 aaKnown RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 CSTF3Q12996 717 aaKnown RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 GRIN2CQ14957 1233 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 HENMT1Q5T8I9 393 aaKnown RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 PKP4Q99569 1192 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 TM9SF3Q9HD45 589 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 TBC1D23Q9NUY8 699 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 FZD4Q9ULV1 537 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 CORINQ9Y5Q5 1042 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 HIDE1A8MVS5 230 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 NPIPB8E9PQR5 432 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 PSIP1O75475 530 aaKnown RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 PCMT1P22061 227 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 GABARAPL2P60520 117 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 OR8J2Q8NGG1 315 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 HUS1BQ8NHY5 278 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 BTN2A2Q8WVV5 523 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 PLEKHA8Q96JA3 519 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 TRIT1Q9H3H1 467 aaKnown RBP17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 RASSF1Q9NS23 344 aa17.48■□□□□ 0.39
UBQLN4-201ENST00000368309 GNG14A0A1W2PPG7 69 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 ADH1AP07327 375 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 PPM1AP35813 382 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 RAE1P78406 368 aaKnown RBP17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 TOP3AQ13472 1001 aaPredicted RBP17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 ZNF284Q2VY69 593 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 TBC1D25Q3MII6 688 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 CPTPQ5TA50 214 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 C16orf87Q6PH81 154 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 TMEM220Q6QAJ8 160 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 ANGPTL8Q6UXH0 198 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 PIWIL3Q7Z3Z3 882 aaKnown RBP17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 B3GNT8Q7Z7M8 397 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 TRIM74Q86UV6 250 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 SLC15A4Q8N697 577 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 ATG16L2Q8NAA4 619 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 DDHD1Q8NEL9 900 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 OR7G3Q8NG95 312 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 BORCS5Q969J3 196 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 MUL1Q969V5 352 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 WRAP53Q9BUR4 548 aaKnown RBP17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 GPN2Q9H9Y4 310 aaPredicted RBP17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 GMPPBQ9Y5P6 360 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 MYO1DO94832 1006 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 IMPA1P29218 277 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 LSM3P62310 102 aaKnown RBP17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 NTHL1P78549 312 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 TMEM115Q12893 351 aaPredicted RBP17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 ACOX1Q15067 660 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 MOGQ16653 247 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 NEK10Q6ZWH5 1172 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 TRAM1L1Q8N609 369 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 FCRL1Q96LA6 429 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 RPS6KA6Q9UK32 745 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 PCDHB11Q9Y5F2 797 aa17.47■□□□□ 0.39
UBQLN4-201ENST00000368309 WASH3PC4AMC7 463 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 DNAJA1P31689 397 aaKnown RBP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 ERVFC1P60507 584 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 ZC3H12BQ5HYM0 836 aaKnown RBP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 KDM4DQ6B0I6 523 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 CCDC81Q6ZN84 652 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 SLC16A12Q6ZSM3 486 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 MSANTD1Q6ZTZ1 278 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 TTC29Q8NA56 475 aaPredicted RBP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 NEIL2Q969S2 332 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 AP2M1Q96CW1 435 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 RAD21L1Q9H4I0 556 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 FAM120CQ9NX05 1096 aaKnown RBP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 NDUFS2O75306 463 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 NPTX1Q15818 432 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 ZSCAN5AQ9BUG6 496 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 SIRT5Q9NXA8 310 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 KIF17Q9P2E2 1029 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 COQ6Q9Y2Z9 468 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 SERTM1A2A2V5 107 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 SAP18O00422 153 aaKnown RBP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 UGDHO60701 494 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 UGT2B11O75310 529 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 AP2A2O94973 939 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 CATP04040 527 aaKnown RBP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 ITGAMP11215 1152 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 SYN1P17600 705 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 GSSP48637 474 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 RPS13P62277 151 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms