RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NOVA1P51513 510 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 PPP5CP53041 499 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ERVPABLB-1P60509 514 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 TUBA1BP68363 451 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 SLC35A2P78381 396 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 TEKQ02763 1124 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 CDK5R2Q13319 367 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 KRR1Q13601 381 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 SELPLGQ14242 412 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 POLD3Q15054 466 aaPredicted RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 CTU2Q2VPK5 515 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 DEPDC1Q5TB30 811 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 TUBA1AQ71U36 451 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 CHST15Q7LFX5 561 aaPredicted RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 KDELC2Q7Z4H8 507 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 SLCO6A1Q86UG4 719 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 P2RY8Q86VZ1 359 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 DCP2Q8IU60 420 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 ETFBKMTQ8IXQ9 262 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ARL10Q8N8L6 244 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 OR13C4Q8NGS5 318 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 DYNC2LI1Q8TCX1 351 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 BLOC1S5Q8TDH9 187 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 UBTD2Q8WUN7 234 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 GTF2H4Q92759 462 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 RHBDF1Q96CC6 855 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 OTUB2Q96DC9 234 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 PPM1MQ96MI6 270 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 SLX1AQ9BQ83 275 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 NACA2Q9H009 215 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 MAGEH1Q9H213 219 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ATP13A3Q9H7F0 1226 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 NMUR1Q9HB89 426 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 MOV10Q9HCE1 1003 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 TMEM9BQ9NQ34 198 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 SLAMF8Q9P0V8 285 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 TBC1D14Q9P2M4 693 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ADGRE2Q9UHX3 823 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 EVLQ9UI08 416 aaPredicted RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 MBD1Q9UIS9 605 aaPredicted RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 IKZF3Q9UKT9 509 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 CCL27Q9Y4X3 112 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ARL5AQ9Y689 179 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 PCDH15Q96QU1 1955 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 CACNA1GO43497 2377 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 DSPP15924 2871 aaKnown RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 UBA6A0AVT1 1052 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 C2orf81A6NN90 581 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 E9PQ18 207 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 GNGT2O14610 69 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 BCKDKO14874 412 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 WNT9AO14904 365 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 COCHO43405 550 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 B4GAT1O43505 415 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 RGS14O43566 566 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 KDM1AO60341 852 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 KLF8O95600 359 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 ANGPTL1O95841 491 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 ADH1CP00326 375 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 S100BP04271 92 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 ADH5P11766 374 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 CEACAM1P13688 526 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 EFNA1P20827 205 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 LPOP22079 712 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 RPS3P23396 243 aaKnown RBP eCLIP11.17□□□□□ -0.62
USF1-201ENST00000368019 PRDX3P30048 256 aaKnown RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 TIE1P35590 1138 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 PTGER3P43115 390 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 DHPSP49366 369 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 ST13P50502 369 aaKnown RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 MTPNP58546 118 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 EMX1Q04741 257 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 ABHD18Q0P651 414 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 NR6A1Q15406 480 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 MEP1AQ16819 746 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 AP5B1Q2VPB7 878 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 PLEKHG6Q3KR16 790 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 TTLL9Q3SXZ7 439 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 ALFQ53S48 1182 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 CDKL4Q5MAI5 379 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 EOGTQ5NDL2 527 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 LY6G5CQ5SRR4 150 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 C1QTNF12Q5T7M4 302 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 TMEM53Q6P2H8 277 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 DET1Q7L5Y6 550 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 FRMD1Q8N878 549 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 SCAMP5Q8TAC9 235 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 METTL6Q8TCB7 284 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 CD200R1Q8TD46 325 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 RLN3Q8WXF3 142 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 FBXO32Q969P5 355 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 WBP2Q969T9 261 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 FAM162AQ96A26 154 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 TXNDC15Q96J42 360 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 PSKH2Q96QS6 385 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 SIGLEC11Q96RL6 698 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 PITX2Q99697 317 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 CTRCQ99895 268 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 APOL4Q9BPW4 351 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms