RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 HERVK_113P63132 956 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 SLC25A3Q00325 362 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 GPR68Q15743 365 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 PARP6Q2NL67 630 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 KYAT3Q6YP21 454 aaKnown RBP8.42□□□□□ -1.06
SYNE1-206ENST00000367253 CERS6Q6ZMG9 384 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 PCDH19Q8TAB3 1148 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 RXFP2Q8WXD0 754 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 CORO2AQ92828 525 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 SLC39A13Q96H72 371 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 BTBD2Q9BX70 525 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 THAP2Q9H0W7 228 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 C1orf21Q9H246 121 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 FZD3Q9NPG1 666 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 CORO2BQ9UQ03 480 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 INSL5Q9Y5Q6 135 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 PEX16Q9Y5Y5 336 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 PRAMEF33A0A0G2JMD5 474 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 FTCDNL1E5RQL4 147 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 PLK4O00444 970 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 WNT9AO14904 365 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 GFRA3O60609 400 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 PRAMEF10O60809 474 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 OTCP00480 354 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 SRCP12931 536 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 IFI35P80217 286 aaPredicted RBP8.42□□□□□ -1.06
SYNE1-206ENST00000367253 TGFBR3Q03167 851 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 BRAT1Q6PJG6 821 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 ANKRD52Q8NB46 1076 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 TMEM104Q8NE00 496 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 IGDCC4Q8TDY8 1250 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 NXNL1Q96CM4 212 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 TREM1Q9NP99 234 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 IL36AQ9UHA7 158 aa8.42□□□□□ -1.06
SYNE1-206ENST00000367253 GOLGA4Q13439 2230 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PRSS47A8MTI9 375 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TSPAN6O43657 245 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 GJB5O95377 273 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 CLIC3O95833 236 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TXNDC12O95881 172 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 HSD3B2P26439 372 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 HERC3Q15034 1050 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PPA1Q15181 289 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TEAD2Q15562 447 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ABHD12BQ7Z5M8 362 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TMEM178AQ8NBL3 297 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ZMIZ2Q8NF64 920 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 NOL11Q9H8H0 719 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 UBTD1Q9HAC8 227 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SPAG4Q9NPE6 437 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 MOCS1Q9NZB8 636 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PTTG3PQ9NZH4 202 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 AASSQ9UDR5 926 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF891A8MT65 544 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TGOLN2O43493 480 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 WDPCPO95876 746 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 HMGN1P05114 100 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 RHOP08100 348 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 MAKP20794 623 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 CDH5P33151 784 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 MAGEA11P43364 429 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 STT3AP46977 705 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 DBPQ10586 325 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 BTN1A1Q13410 526 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 FIGLAQ6QHK4 219 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ADAMTSL2Q86TH1 951 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 C11orf65Q8NCR3 313 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 OR14K1Q8NGZ2 314 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ADAMTS19Q8TE59 1207 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 AENQ8WTP8 325 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 IGSF21Q96ID5 467 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PPM1MQ96MI6 270 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 NTPCRQ9BSD7 190 aaKnown RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 AGXT2Q9BYV1 514 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 REEP4Q9H6H4 257 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 KCNK13Q9HB14 408 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 PCDH9Q9HC56 1237 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 CALML5Q9NZT1 146 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 TFR2Q9UP52 801 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SRPK3Q9UPE1 567 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 COL1A1P02452 1464 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 E9PAM4 449 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SERPINB7O75635 380 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SASH3O75995 380 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 AKR7A3O95154 331 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 KAT7O95251 611 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 C22orf31O95567 290 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ITGA2P17301 1181 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SLC2A5P22732 501 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 POLD2P49005 469 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 ERVFC1P60507 584 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 DPYSQ14117 519 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 E2F2Q14209 437 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 SEZ6Q53EL9 994 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 OGFRL1Q5TC84 451 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-206ENST00000367253 FAM91A1Q658Y4 838 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 MOB1BQ7L9L4 216 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 LRRTM4Q86VH4 590 aa8.41□□□□□ -1.06
SYNE1-206ENST00000367253 DNAAF5Q86Y56 855 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms