RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 OR5K4A6NMS3 321 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 H0YGN5 161 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 hCG_2039718K7EN88 272 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 THRBP10828 461 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 SRCP12931 536 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 CLCN4P51793 760 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 C1orf94Q6P1W5 598 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 THAP5Q7Z6K1 395 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 MRPL43Q8N983 215 aaKnown RBP11.24□□□□□ -0.61
SYNE1-204ENST00000367248 FCRL3Q96P31 734 aaPredicted RBP11.24□□□□□ -0.61
SYNE1-204ENST00000367248 RASSF1Q9NS23 344 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 GIN1Q9NXP7 522 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 BTN3A3O00478 584 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 GGT5P36269 586 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 CYS1Q717R9 158 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 CD244Q9BZW8 370 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 CLK4Q9HAZ1 481 aaKnown RBP11.24□□□□□ -0.61
SYNE1-204ENST00000367248 PDE7BQ9NP56 450 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 SPATA7Q9P0W8 599 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 POMPQ9Y244 141 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 RNF11Q9Y3C5 154 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 CCNB2O95067 398 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 RPS15P62841 145 aaKnown RBP11.24□□□□□ -0.61
SYNE1-204ENST00000367248 UBQLNLQ8IYU4 475 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 FCRL4Q96PJ5 515 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 CHID1Q9BWS9 393 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 PAIP1Q9H074 479 aaKnown RBP11.24□□□□□ -0.61
SYNE1-204ENST00000367248 ZDHHC2Q9UIJ5 367 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 PHF11Q9UIL8 331 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 A0A1B0GW55 424 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 IRGMA1A4Y4 181 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 WASH3PC4AMC7 463 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 VEGFDO43915 354 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 ZNF217O75362 1048 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 DUX4L2P0CJ85 424 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 DUX4L3P0CJ86 424 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 DUX4L4P0CJ87 422 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 DUX4L5P0CJ88 424 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 DUX4L6P0CJ89 424 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 DUX4L7P0CJ90 424 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 MPC1LP0DKB6 136 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 C6P13671 934 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 GATSQ8NAP1 163 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 FAR1Q8WVX9 515 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 COQ7Q99807 217 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 NOL6Q9H6R4 1146 aaKnown RBP11.24□□□□□ -0.61
SYNE1-204ENST00000367248 DUX4Q9UBX2 424 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 CACNA1FO60840 1977 aa11.24□□□□□ -0.61
SYNE1-204ENST00000367248 SERPINA1P01009 418 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 GNALP38405 381 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 HNRNPKP61978 463 aaKnown RBP eCLIP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 DEFB110Q30KQ9 67 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 EIPR1Q53HC9 387 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 ZDHHC21Q8IVQ6 265 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 ZDHHC14Q8IZN3 488 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 TOE1Q96GM8 510 aaKnown RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 RFPL1O75677 317 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 ALPPP05187 535 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 C5AR1P21730 350 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 DGKQP52824 942 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 FRMD7Q6ZUT3 714 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 SCRN2Q96FV2 425 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 MRPL39Q9NYK5 338 aaKnown RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 KLHL33A6NCF5 533 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 NME6O75414 186 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 WBP4O75554 376 aaKnown RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 DBIP07108 87 aaKnown RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 CBLP22681 906 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 OXTRP30559 389 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 ARSDP51689 593 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 ERVFC1P60507 584 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 LSM3P62310 102 aaKnown RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 ZNF267Q14586 743 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 MZT2AQ6P582 158 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 COL21A1Q96P44 957 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 FAM192AQ9GZU8 254 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 FBRSQ9HAH7 460 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 CSNK1G1Q9HCP0 422 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 MARCH4Q9P2E8 410 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 HYKKA2RU49 373 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 CLIC1O00299 241 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 KLHL18O94889 574 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 SEC24AO95486 1093 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 CDH1P12830 882 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 RANBP1P43487 201 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 C10orf62Q5T681 223 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 RANBP10Q6VN20 620 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 TICAM1Q8IUC6 712 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 SLC34A3Q8N130 599 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 CHST14Q8NCH0 376 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 PTCHD1Q96NR3 888 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 IL1RAPQ9NPH3 570 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 C19orf25Q9UFG5 118 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 HEMK1Q9Y5R4 338 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-204ENST00000367248 ACTL7AQ9Y615 435 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 SLC16A5O15375 505 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 GJA8P48165 433 aa11.23□□□□□ -0.61
SYNE1-204ENST00000367248 DSTNP60981 165 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms