RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 KCNC2Q96PR1 638 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 SPIN1Q9Y657 262 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 RPS24P62847 133 aaKnown RBP11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 UPP1Q16831 310 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 CNDP2Q96KP4 475 aaKnown RBP11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 TEPSINQ96N21 525 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 MNDAP41218 407 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 CXCR4P61073 352 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 EXOSC8Q96B26 276 aaKnown RBP11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 UCK2Q9BZX2 261 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 SYNDIG1Q9H7V2 258 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 PPP5CP53041 499 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 MGME1Q9BQP7 344 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 ABCG8Q9H221 673 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 TRBC2A0A5B9 178 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 J3KR12 359 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 ITGB1P05556 798 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 KCNA7Q96RP8 456 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 DSN1Q9H410 356 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 CDH10Q9Y6N8 788 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 GRID2O43424 1007 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 ONECUT3O60422 494 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 RLN1P04808 185 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 CPOXP36551 454 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 MYBPC1Q00872 1141 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 OLIG2Q13516 323 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 KCNA10Q16322 511 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 LGALS12Q96DT0 336 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 MED11Q9P086 117 aa11.46□□□□□ -0.57
CDC42BPA-202ENST00000366764 DCKP27707 260 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 CARM1Q86X55 608 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAM98AQ8NCA5 519 aaKnown RBP11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 CDK15Q96Q40 435 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 LIN28AQ9H9Z2 209 aaKnown RBP11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 IGSF5Q9NSI5 407 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 SSC5DA1L4H1 1573 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 PRAMEF33A0A0G2JMD5 474 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 PRAMEF10O60809 474 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 SNX4O95219 450 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 ST3GAL4Q11206 333 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 PTGR1Q14914 329 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZNF248Q8NDW4 579 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 TNFAIP8L1Q8WVP5 186 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 TTYH1Q9H313 450 aaPredicted RBP11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 TMEM39AQ9NV64 488 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 EMCNQ9ULC0 261 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 CDC14AQ9UNH5 594 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 ERVK-11Q9UQG0 969 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 AURKAO14965 403 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR4Q2P0C623 313 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 NPRL3Q12980 569 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 WSCD2Q2TBF2 565 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 TPRG1Q6ZUI0 275 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 AQP11Q8NBQ7 271 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR2AP1Q8NGE2 309 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 VANGL1Q8TAA9 524 aaPredicted RBP11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 PIP5K1AQ99755 562 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 BAIAP2Q9UQB8 552 aa11.46□□□□□ -0.58
CDC42BPA-202ENST00000366764 STBD1O95210 358 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZNF24P17028 368 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 PLA2G16P53816 162 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 GPR17Q13304 367 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CFAP206Q8IYR0 622 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 NPWQ8N729 165 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 TMEM175Q9BSA9 504 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 FUNDC2Q9BWH2 189 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ARNT2Q9HBZ2 717 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZDHHC4Q9NPG8 344 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 NME4O00746 187 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZNF3P17036 446 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 IL4RP24394 825 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CLDN8P56748 225 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 NFATC2Q13469 925 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CXorf57Q6NSI4 855 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 BAIAP2L2Q6UXY1 529 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CMTR2Q8IYT2 770 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CCDC107Q8WV48 283 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 MOAP1Q96BY2 351 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ATP1B2P14415 290 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 IDSP22304 550 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 NRIP1P48552 1158 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZNF792Q3KQV3 632 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CES5AQ6NT32 575 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ISCA2Q86U28 154 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 MAPK15Q8TD08 544 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 NFATC1O95644 943 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CDK4P11802 303 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 IST1P53990 364 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 C1QTNF8P60827 252 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 MS4A2Q01362 244 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 PCBP2Q15366 365 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■■■■ 64
CDC42BPA-202ENST00000366764 PDCD10Q9BUL8 212 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 WDR81Q562E7 1941 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 A0A1W2PQ72 361 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZNF879B4DU55 563 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 H3BMQ9 156 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZNF623O75123 536 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 LATS1O95835 1130 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms