RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 DUOXA1Q1HG43 343 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 IQCCQ4KMZ1 466 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 CRTC2Q53ET0 693 aaPredicted RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 GCNT6Q5T4J0 391 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 NLGN4XQ8N0W4 816 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 ELMOD1Q8N336 334 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 DBF4BQ8NFT6 615 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 OR9Q2Q8NGE9 314 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 IPCEF1Q8WWN9 437 aaPredicted RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TRIM63Q969Q1 353 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SPRTNQ9H040 489 aaPredicted RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 MMP27Q9H306 513 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 DCAF13Q9NV06 445 aaKnown RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SARDHQ9UL12 918 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 ANGPT4Q9Y264 503 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 PCDHGA4Q9Y5G9 962 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 MROH6A6NGR9 719 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 H3BM21 787 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CDRT1O95170 752 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 LRG1P02750 347 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 FHP07954 510 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ITIH1P19827 911 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CCT3P49368 545 aaKnown RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SRSF11Q05519 484 aaKnown RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 GRB14Q14449 540 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 PCBP2Q15366 365 aaKnown RBP eCLIP13.24□□□□□ -0.293e-9■■■■■ 47.4
SGMS1-202ENST00000361781 TYSND1Q2T9J0 566 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ADGRF1Q5T601 910 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SUSD1Q6UWL2 747 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SLC5A8Q8N695 610 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ZNF548Q8NEK5 533 aaPredicted RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 RAB8BQ92930 207 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CEP295NLQ96MC4 621 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CDK5RAP1Q96SZ6 601 aaKnown RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 MGLLQ99685 303 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 PTPN18Q99952 460 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 YIPF4Q9BSR8 244 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 MCMBPQ9BTE3 642 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 GPN2Q9H9Y4 310 aaPredicted RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 POPDC3Q9HBV1 291 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 FLRT1Q9NZU1 646 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SEC14L3Q9UDX4 400 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ERVK-11Q9UQG0 969 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 GSTK1Q9Y2Q3 226 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CLCA3PQ9Y6N3 262 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 LOC285095A0A1B0GVY8 99 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 OR6C75A6NL08 312 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CCNB2O95067 398 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 HPRP00739 348 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 EBLN1P0CF75 366 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 LAMP1P11279 417 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 GABRR2P28476 465 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CDKN2CP42773 168 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ELAVL2Q12926 359 aaKnown RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 TARDBPQ13148 414 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■■■□ 26.2
SGMS1-202ENST00000361781 NFATC2Q13469 925 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 INAVAQ3KP66 663 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CARD16Q5EG05 197 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 USP50Q70EL3 339 aaPredicted RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 BEND5Q7L4P6 421 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 LINC01465Q8N7H1 131 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ASZ1Q8WWH4 475 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 UHRF1Q96T88 793 aaPredicted RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SLC30A2Q9BRI3 323 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SLC35A5Q9BS91 424 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ASPNQ9BXN1 380 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 NECTIN3Q9NQS3 549 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SEMA3GQ9NS98 782 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 STMN3Q9NZ72 180 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 PTGFRNQ9P2B2 879 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CFAP97Q9P2B7 532 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 HAT1O14929 419 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CH25HO95992 272 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 ETFAP13804 333 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 PPP2R1BP30154 601 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SSTR4P31391 388 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 GP2P55259 537 aaKnown RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 RPS26P62854 115 aaKnown RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 VLDLRP98155 873 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 MVKQ03426 396 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 NFE2L1Q14494 772 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 SETMARQ53H47 684 aaPredicted RBP13.24□□□□□ -0.29
SGMS1-202ENST00000361781 LIPKQ5VXJ0 399 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 FAM171BQ6P995 826 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 TMEM179BQ7Z7N9 219 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 KCNH6Q9H252 994 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 CFL2Q9Y281 166 aa13.24□□□□□ -0.29
SGMS1-202ENST00000361781 FAM155AB1AL88 458 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-202ENST00000361781 PLK4O00444 970 aa13.23□□□□□ -0.29
SGMS1-202ENST00000361781 SCAMP1O15126 338 aa13.23□□□□□ -0.29
SGMS1-202ENST00000361781 PCDH7O60245 1069 aa13.23□□□□□ -0.29
SGMS1-202ENST00000361781 DUSP11O75319 330 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms