RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 SLC22A9Q8IVM8 553 aa17.14■□□□□ 0.33
CLK2-202ENST00000361168 DTWD1Q8N5C7 304 aa17.14■□□□□ 0.33
CLK2-202ENST00000361168 OR1L3Q8NH93 324 aa17.14■□□□□ 0.33
CLK2-202ENST00000361168 ZNF501Q96CX3 271 aaPredicted RBP17.14■□□□□ 0.33
CLK2-202ENST00000361168 OR2A5Q96R48 311 aa17.14■□□□□ 0.33
CLK2-202ENST00000361168 STRADBQ9C0K7 418 aa17.14■□□□□ 0.33
CLK2-202ENST00000361168 SPRTNQ9H040 489 aaPredicted RBP17.14■□□□□ 0.33
CLK2-202ENST00000361168 TMEM184CQ9NVA4 438 aa17.14■□□□□ 0.33
CLK2-202ENST00000361168 ZNF490Q9ULM2 529 aaPredicted RBP17.14■□□□□ 0.33
CLK2-202ENST00000361168 MDC1Q14676 2089 aaKnown RBP17.14■□□□□ 0.33
CLK2-202ENST00000361168 TMEM150CB9EJG8 249 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 H3BMH7 237 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 CCNDBP1O95273 360 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 C1GALT1C1LP0DN25 315 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 IRF8Q02556 426 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 SLBPQ14493 270 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLK2-202ENST00000361168 KMT5CQ86Y97 462 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 CARFQ8N187 725 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 CCDC187A0A096LP49 1063 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 CLGNO14967 610 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 TRIM13O60858 407 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 EIF2S1P05198 315 aaKnown RBP17.13■□□□□ 0.33
CLK2-202ENST00000361168 CHRNGP07510 517 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 ARL1P40616 181 aaPredicted RBP17.13■□□□□ 0.33
CLK2-202ENST00000361168 DNAJB13P59910 316 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 ERVPABLB-1P60509 514 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 HKDC1Q2TB90 917 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 ATG9BQ674R7 924 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 LETMD1Q6P1Q0 360 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 RNF44Q7L0R7 432 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 VN1R4Q7Z5H5 301 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 NUDCD3Q8IVD9 361 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 MCATQ8IVS2 390 aaKnown RBP17.13■□□□□ 0.33
CLK2-202ENST00000361168 OR4F6Q8NGB9 312 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 PPP4R1Q8TF05 950 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 C20orf27Q9GZN8 174 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 GPRC5BQ9NZH0 403 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 TMCO1Q9UM00 188 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 B3GALT1Q9Y5Z6 326 aa17.13■□□□□ 0.33
CLK2-202ENST00000361168 P2RX6O15547 441 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 OR1F1O43749 312 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 JMJD7P0C870 316 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 FOXA1P55317 472 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 VSX2P58304 361 aaPredicted RBP17.12■□□□□ 0.33
CLK2-202ENST00000361168 CYP4F2P78329 520 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 RBBP7Q16576 425 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 CPSF6Q16630 551 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLK2-202ENST00000361168 TCHHL1Q5QJ38 904 aaPredicted RBP17.12■□□□□ 0.33
CLK2-202ENST00000361168 PWWP2BQ6NUJ5 590 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 SYVN1Q86TM6 617 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 LSMEM2Q8N112 164 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 OR6Y1Q8NGX8 325 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 ATP6V1E2Q96A05 226 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 CCDC126Q96EE4 140 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 KCNA7Q96RP8 456 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 ZFYVE21Q9BQ24 234 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 ACTR8Q9H981 624 aa17.12■□□□□ 0.33
CLK2-202ENST00000361168 MED19A0JLT2 244 aaPredicted RBP17.11■□□□□ 0.33
CLK2-202ENST00000361168 C9orf172C9J069 976 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 H0YGG7 62 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 TBX6O95947 436 aaPredicted RBP17.11■□□□□ 0.33
CLK2-202ENST00000361168 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 ZNF28P17035 718 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 BGNP21810 368 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
CLK2-202ENST00000361168 GABREP78334 506 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 RBBP5Q15291 538 aaKnown RBP17.11■□□□□ 0.33
CLK2-202ENST00000361168 FRMD7Q6ZUT3 714 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 VN1R5Q7Z5H4 357 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 SHISA5Q8N114 240 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 CACTIN-AS1Q8N1I8 211 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 SLC38A9Q8NBW4 561 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 WDR36Q8NI36 951 aaKnown RBP17.11■□□□□ 0.33
CLK2-202ENST00000361168 SLC39A1Q9NY26 324 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 TRABD2BA6NFA1 517 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 FFAR3O14843 346 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 GPR42O15529 346 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 ATP8B1O43520 1251 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 ITM2AO43736 263 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 LYPLA1O75608 230 aaPredicted RBP17.11■□□□□ 0.33
CLK2-202ENST00000361168 OR4F21O95013 312 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 TNFSF15O95150 251 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 FKBP9O95302 570 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 MED26O95402 600 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 ADRB1P08588 477 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 EZRP15311 586 aaKnown RBP17.11■□□□□ 0.33
CLK2-202ENST00000361168 CHN1P15882 459 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 ATP1A2P50993 1020 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 NEK2P51955 445 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 CCNG1P51959 295 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 PPP2R2AP63151 447 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 REEP5Q00765 189 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 MC2RQ01718 297 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 E2F2Q14209 437 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 CFAP157Q5JU67 520 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 HHATQ5VTY9 493 aa17.11■□□□□ 0.33
CLK2-202ENST00000361168 USP7Q93009 1102 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms