RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 C9orf16Q9BUW7 83 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CLK4Q9HAZ1 481 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PTBP2Q9UKA9 531 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 SLC8A2Q9UPR5 921 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PKP3Q9Y446 797 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 NEUROG3Q9Y4Z2 214 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 KANSL1LA0AUZ9 987 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 NOTOA8MTQ0 251 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TAPBPO15533 448 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TBL1XO60907 577 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 BMP10O95393 424 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 CAPN1P07384 714 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 GNAO1P09471 354 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 MYF5P13349 255 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TYRP1P17643 537 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 HOXD10P28358 340 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 PPP3CCP48454 512 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ALDH7A1P49419 539 aaKnown RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 HTR6P50406 440 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ZXDBP98169 803 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TWF1Q12792 350 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 PRKG2Q13237 762 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 GTF2H2Q13888 395 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 KIAA0040Q15053 153 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 CYP27C1Q4G0S4 372 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TMTC4Q5T4D3 741 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ATXN7L2Q5T6C5 722 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 KRT80Q6KB66 452 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 GTF2H2CQ6P1K8 395 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SLCO6A1Q86UG4 719 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 PROSER1Q86XN7 944 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 FAM47BQ8NA70 645 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 OR4F6Q8NGB9 312 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ASB12Q8WXK4 309 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TP53INP1Q96A56 240 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RMND5BQ96G75 393 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 IGSF21Q96ID5 467 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RPL10LQ96L21 214 aaKnown RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ADI1Q9BV57 179 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 C1orf43Q9BWL3 253 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RPF2Q9H7B2 306 aaKnown RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TUBA8Q9NY65 449 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 VPS51Q9UID3 782 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 OAZ3Q9UMX2 235 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TRBV5-4A0A0C4DH59 114 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 H0Y626 953 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 INPP4BO15327 924 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 FFAR2O15552 330 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 GLUD1P00367 558 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ALPIP09923 528 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 G6PDP11413 515 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 NCK1P16333 377 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 NELFEP18615 380 aaKnown RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SLC5A2P31639 672 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SLC16A1P53985 500 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SUMO3P55854 103 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RHOAP61586 193 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 AP1S1P61966 158 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RPS16P62249 146 aaKnown RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 PLOD1Q02809 727 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TRAF3Q13114 568 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 PLD1Q13393 1074 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 FUT11Q495W5 492 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 KCTD21Q4G0X4 260 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 AASDHQ4L235 1098 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TIGD2Q4W5G0 525 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 HLA-DQA1Q5Y7H0 255 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TPGS2Q68CL5 300 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SLC2A7Q6PXP3 512 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RNF165Q6ZSG1 346 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RIMKLAQ8IXN7 391 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 FAM217AQ8IXS0 508 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 TBC1D21Q8IYX1 336 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 CARNMT1Q8N4J0 409 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 METTL6Q8TCB7 284 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 WFDC5Q8TCV5 224 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 CD99L2Q8TCZ2 262 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 RAET1EQ8TD07 263 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SEZ6LQ9BYH1 1024 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 GPR63Q9BZJ6 419 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 CIPCQ9C0C6 399 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SARS2Q9NP81 518 aaKnown RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ELOVL2Q9NXB9 296 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SUN2Q9UH99 717 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 USP22Q9UPT9 525 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 PRSS21Q9Y6M0 314 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 SLC30A1Q9Y6M5 507 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 PDE4DIPQ5VU43 2346 aa7.11□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF106Q9H2Y7 1883 aaKnown RBP7.11□□□□□ -1.27
CLCN3-202ENST00000360642 C5orf42Q9H799 3197 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 A0A1B0GVG6 124 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 K7ERQ8 282 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 TPST1O60507 370 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 RSL1D1O76021 490 aaKnown RBP7.1□□□□□ -1.27
CLCN3-202ENST00000360642 CXCL10P02778 98 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 CTPS1P17812 591 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 MSH3P20585 1137 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 JAK1P23458 1154 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 PCSK6P29122 969 aa7.1□□□□□ -1.27
CLCN3-202ENST00000360642 CSKP41240 450 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms