RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 PER2O15055 1255 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 SEMG1P04279 462 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 GABRB1P18505 474 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 NUDT6P53370 316 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 ABATP80404 500 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 COX10Q12887 443 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 EXOSC2Q13868 293 aaKnown RBP12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 UBR3Q6ZT12 1888 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 ZNF605Q86T29 641 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 GLCCI1Q86VQ1 547 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 PHACTR4Q8IZ21 702 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 STAG3L4Q8TBR4 150 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 CHTF18Q8WVB6 975 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 KIAA1191Q96A73 305 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 DIRAS2Q96HU8 199 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 PPP1R2P1Q96PQ5 205 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 SLC6A15Q9H2J7 730 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 GALNT9Q9HCQ5 603 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 SLC39A1Q9NY26 324 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 COPS3Q9UNS2 423 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 TRAV19A0A0A6YYK7 116 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 GFRA2O00451 464 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 CCNDBP1O95273 360 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 FABP3P05413 133 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 HOXB8P17481 243 aaPredicted RBP12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 RAB3AP20336 220 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 AP1S2P56377 157 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 SEMA3AQ14563 771 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 NADSYN1Q6IA69 706 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 BBS7Q8IWZ6 715 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 KCT2Q8NC54 265 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 DENND6BQ8NEG7 585 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 CLHC1Q8NHS4 586 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 CREB3L4Q8TEY5 395 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 SMG7Q92540 1137 aaKnown RBP12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 FAM120BQ96EK7 910 aaKnown RBP12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 ZNF416Q9BWM5 594 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 FSD1LQ9BXM9 530 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 MRPS7Q9Y2R9 242 aaKnown RBP12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 CLCA3PQ9Y6N3 262 aa12.9□□□□□ -0.34
SPTSSB-201ENST00000359175 H3BM21 787 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 PRKAR1AP10644 381 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 PTPRAP18433 802 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ITGB7P26010 798 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 SCRN3Q0VDG4 424 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 SLC10A6Q3KNW5 377 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 DACT2Q5SW24 774 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 LDB1Q86U70 411 aaPredicted RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 UNC93AQ86WB7 457 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ZZZ3Q8IYH5 903 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 NDRG1Q92597 394 aaKnown RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ZBED6CLQ96FA7 236 aaPredicted RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 LINC00052Q96N35 136 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 MFSD1Q9H3U5 465 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ZFP64Q9NPA5 681 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 EXOSC4Q9NPD3 245 aaKnown RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 RAD18Q9NS91 495 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 NLKQ9UBE8 527 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 PCTPQ9UKL6 214 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 OGDHLQ9ULD0 1010 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 NDRG2Q9UN36 371 aaKnown RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 FAM240BA0A1B0GVZ2 78 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 I6L893 689 aaPredicted RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 PLOD3O60568 738 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 SCG5P05408 212 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ADORA2BP29275 332 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 CSTF3Q12996 717 aaKnown RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 PCBP1Q15365 356 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 LRFN4Q6PJG9 635 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 Q6ZPB1 254 aaPredicted RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 TRILQ7L0X0 811 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 TIGD4Q8IY51 512 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 C19orf18Q8NEA5 215 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 OR56A4Q8NGH8 313 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 AHCYL2Q96HN2 611 aaKnown RBP12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 PCYT2Q99447 389 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ZBTB18Q99592 522 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 REEP1Q9H902 201 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ZNF112Q9UJU3 913 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 ACSL5Q9ULC5 683 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 RNF112Q9ULX5 631 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 KCNMB2Q9Y691 235 aa12.89□□□□□ -0.35
SPTSSB-201ENST00000359175 A0A1W2PQL4 384 aaPredicted RBP12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 PRSS44E7EML9 344 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 HRO43593 1189 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 DPM1O60762 260 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 ZNF682O95780 498 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 RAB14P61106 215 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 GPRIN3Q6ZVF9 776 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 PCNPQ8WW12 178 aaKnown RBP12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 SLC25A46Q96AG3 418 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 SAMD11Q96NU1 681 aa12.88□□□□□ -0.35
SPTSSB-201ENST00000359175 KCNC2Q96PR1 638 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms