RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 MYO1CO00159 1063 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 UBDO15205 165 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TGDSO95455 350 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TCN2P20062 427 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 BGNP21810 368 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 FASLGP48023 281 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 FOXK2Q01167 660 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 ABHD18Q0P651 414 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 WASHC2DQ5SRD0 308 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 BEND6Q5SZJ8 279 aaPredicted RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 PEAR1Q5VY43 1037 aaPredicted RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 GRHL2Q6ISB3 625 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 IGDCC3Q8IVU1 814 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 MIER2Q8N344 545 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 REXO4Q9GZR2 422 aaKnown RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 EHD1Q9H4M9 534 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 PNO1Q9NRX1 252 aaKnown RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 SH3BP4Q9P0V3 963 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 FBXW2Q9UKT8 454 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 PIK3CBP42338 1070 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 CASP6P55212 293 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 PLIN5Q00G26 463 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 MESP2Q0VG99 397 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TTLL10Q6ZVT0 673 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 NRROSQ86YC3 692 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 OR5L2Q8NGL0 311 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 GAL3ST3Q96A11 431 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TMEM125Q96AQ2 219 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 OTUB1Q96FW1 271 aaPredicted RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 EPS8L2Q9H6S3 715 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 NT5DC2Q9H857 520 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TMEM216Q9P0N5 145 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 PCOLCE2Q9UKZ9 415 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 PLEKHM1Q9Y4G2 1056 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 CLCA3PQ9Y6N3 262 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 DYTNA2CJ06 578 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 SOX30O94993 753 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 PRDX3P30048 256 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 AGTR2P50052 363 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 FRG2Q64ET8 278 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 FRG2BQ96QU4 278 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 ZNF304Q9HCX3 659 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 ZNF282Q9UDV7 671 aaPredicted RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 FAF1Q9UNN5 650 aaPredicted RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 IGLV3-16A0A075B6K0 115 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 RSL1D1O76021 490 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 CLCN7P51798 805 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 OR4D2P58180 307 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 CYLC2Q14093 348 aaPredicted RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 CAPRIN2Q6IMN6 1127 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 SUSD1Q6UWL2 747 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 FAM47EQ6ZV65 393 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 ADCY4Q8NFM4 1077 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 JADE3Q92613 823 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 MKS1Q9NXB0 559 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 NOP53Q9NZM5 478 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 PADI1Q9ULC6 663 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 OR10H1Q9Y4A9 318 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 CXorf49A8MYA2 514 aaPredicted RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 H3BNH8 94 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 H7BY64 318 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 SHBGP04278 402 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 BPGMP07738 259 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 PPIBP23284 216 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 MPSTP25325 297 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 IVDP26440 423 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 CAPRIN1Q14444 709 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 PCBP2Q15366 365 aaKnown RBP eCLIP8.84□□□□□ -0.99
UPF2-202ENST00000357604 COLEC12Q5KU26 742 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 C10orf107Q8IVU9 208 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 DAZLQ92904 295 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 NCLNQ969V3 563 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 PRAP1Q96NZ9 151 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 SMIM14Q96QK8 99 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 FUT8Q9BYC5 575 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 MRPL1Q9BYD6 325 aaKnown RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 SLC40A1Q9NP59 571 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 SDHAF3Q9NRP4 125 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 POMT2Q9UKY4 750 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 PTPRDP23468 1912 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 A0A0U1RQS6 177 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 LNP1A1A4G5 178 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 HYKKA2RU49 373 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 ARHGEF33A8MVX0 844 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 MANBAO00462 879 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 BTN3A3O00478 584 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 PRSS56P0CW18 603 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 NT5EP21589 574 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 PDHA2P29803 388 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 CLCA4Q14CN2 919 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 KLHDC8BQ8IXV7 354 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 KBTBD2Q8IY47 623 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 SLC35F3Q8IY50 421 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 EID3Q8N140 333 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 PPFIBP2Q8ND30 876 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 MOAP1Q96BY2 351 aa8.84□□□□□ -0.99
UPF2-202ENST00000357604 RAB3IPQ96QF0 476 aaPredicted RBP8.84□□□□□ -0.99
UPF2-202ENST00000357604 LYPLA1O75608 230 aaPredicted RBP8.84□□□□□ -1
UPF2-202ENST00000357604 ITGA3P26006 1051 aa8.84□□□□□ -1
UPF2-202ENST00000357604 OTX2P32243 289 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms