RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FLRT2O43155 660 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 DUSP11O75319 330 aaKnown RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 MYCLP1P12525 358 aaPredicted RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 AGXTP21549 392 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 WASP42768 502 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 JAM2P57087 298 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 TAF1AQ15573 450 aaPredicted RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 PIGGQ5H8A4 983 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 TMED4Q7Z7H5 227 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 ANKRD46Q86W74 232 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 PLD4Q96BZ4 506 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 SHDQ96IW2 340 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 EPYCQ99645 322 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 TMED9Q9BVK6 235 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 MAGEH1Q9H213 219 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 NKX1-2Q9UD57 310 aaPredicted RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 EVLQ9UI08 416 aaPredicted RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 MYO3AQ8NEV4 1616 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 TMEM150CB9EJG8 249 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 F5H0A9 414 aaPredicted RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 DFNA5O60443 496 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 APOC3P02656 99 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 MMP3P08254 477 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 HSD3B1P14060 373 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 L1CAMP32004 1257 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 NRIP1P48552 1158 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 HERV-K104P61576 105 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 NKAPLQ5M9Q1 402 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 XKR5Q6UX68 686 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 OTOP3Q7RTS5 596 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 ZNF598Q86UK7 904 aaKnown RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 SNX29P2Q8IUI4 249 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 C7orf61Q8IZ16 206 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 HAS1Q92839 578 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 BARD1Q99728 777 aaKnown RBP12.52□□□□□ -0.41
SMC4-202ENST00000357388 SMURF1Q9HCE7 757 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 TAS2R9Q9NYW1 312 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 MGAT4BQ9UQ53 548 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 TLR6Q9Y2C9 796 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 STXBP5LQ9Y2K9 1186 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 DCCP43146 1447 aa12.52□□□□□ -0.41
SMC4-202ENST00000357388 B4GALT4O60513 344 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 LRCH4O75427 683 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 GABARAPL2P60520 117 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 GNMTQ14749 295 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 SPIN4Q56A73 249 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ANKRD22Q5VYY1 191 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 FIP1L1Q6UN15 594 aaKnown RBP12.51□□□□□ -0.41
SMC4-202ENST00000357388 SLC16A9Q7RTY1 509 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ZNF101Q8IZC7 436 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ZSCAN1Q8NBB4 408 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ATP6V1C2Q8NEY4 427 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 OR6K2Q8NGY2 324 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 GAL3ST4Q96RP7 486 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ZNF649Q9BS31 505 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ATG10Q9H0Y0 220 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 PTTG1O95997 202 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 GOT2P00505 430 aaKnown RBP12.51□□□□□ -0.41
SMC4-202ENST00000357388 IFNA5P01569 189 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 PIM1P11309 404 aaPredicted RBP12.51□□□□□ -0.41
SMC4-202ENST00000357388 PRKACAP17612 351 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 TNFSF9P41273 254 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 DUOXA1Q1HG43 343 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 YIPF7Q8N8F6 280 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 PROKR2Q8NFJ6 384 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
SMC4-202ENST00000357388 RAD9AQ99638 391 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 SRMSQ9H3Y6 488 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 OR2AG2A6NM03 316 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 PI15O43692 258 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 B3GALT2O43825 422 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 STBD1O95210 358 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 DGKGP49619 791 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 PITRM1Q5JRX3 1037 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 POGLUT1Q8NBL1 392 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 GLIS3Q8NEA6 775 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 EBPLQ9BY08 206 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ERVK-19Q9WJR5 959 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 SULT1C2O00338 296 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 PLGP00747 810 aaPredicted RBP12.51□□□□□ -0.41
SMC4-202ENST00000357388 CHRM5P08912 532 aaPredicted RBP12.51□□□□□ -0.41
SMC4-202ENST00000357388 NDUFS1P28331 727 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 ABHD18Q0P651 414 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 VITQ6UXI7 678 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 KCTD9Q7L273 389 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 CFAP52Q8N1V2 620 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 PSD4Q8NDX1 1056 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 EBF4Q9BQW3 602 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 CPNE5Q9HCH3 593 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 FZD4Q9ULV1 537 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 TRIM64A6NGJ6 449 aa12.51□□□□□ -0.41
SMC4-202ENST00000357388 E9PAM4 449 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms