RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SLC1A5Q15758 541 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 KLHL36Q8N4N3 616 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 SPRYD4Q8WW59 207 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-201ENST00000356083 PELOQ9BRX2 385 aaKnown RBP16.81■□□□□ 0.28
COL27A1-201ENST00000356083 DNTTIP1Q9H147 329 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 KANSL1Q7Z3B3 1105 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF572Q7Z3I7 529 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-201ENST00000356083 SLC44A3Q8N4M1 653 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 WNT9AO14904 365 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 C8GP07360 202 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 BMP8BP34820 402 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 EOGTQ5NDL2 527 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 TMEM214Q6NUQ4 689 aaKnown RBP16.81■□□□□ 0.28
COL27A1-201ENST00000356083 ARCQ7LC44 396 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 BMP8AQ7Z5Y6 402 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 C12orf40Q86WS4 652 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 DTX3Q8N9I9 347 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 DCBLD2Q96PD2 775 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 TM9SF3Q9HD45 589 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 P2RX2Q9UBL9 471 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 TMEM98Q9Y2Y6 226 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 NSG1P42857 185 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 TAS2R40P59535 323 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 GPR157Q5UAW9 335 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 UBE2Q1Q7Z7E8 422 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF283Q8N7M2 679 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 OR9K2Q8NGE7 335 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 STOML3Q8TAV4 291 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 SH3RF2Q8TEC5 729 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 A0A1W2PPK0 400 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 AARDQ4LEZ3 155 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 TSEN2Q8NCE0 465 aaKnown RBP16.81■□□□□ 0.28
COL27A1-201ENST00000356083 GCDHQ92947 438 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-201ENST00000356083 UBXN10Q96LJ8 280 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 BTBD1Q9H0C5 482 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 FAM118AQ9NWS6 357 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 NUP205Q92621 2012 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 TRAV6A0A075B6T7 132 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 A0A1W2PRB8 838 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 UGT1A9O60656 530 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 UGT1A6P19224 532 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 UGT1A4P22310 534 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 IFI44LQ53G44 452 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 NIPA1Q7RTP0 329 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 REM2Q8IYK8 340 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-201ENST00000356083 LPGAT1Q92604 370 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 PCED1BQ96HM7 432 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 POLR2J3Q9H1A7 115 aaKnown RBP16.8■□□□□ 0.28
COL27A1-201ENST00000356083 ATG5Q9H1Y0 275 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 GBA3Q9H227 469 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 XKR8Q9H6D3 395 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 UGT1A7Q9HAW7 530 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 UGT1A10Q9HAW8 530 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 UGT1A8Q9HAW9 530 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 MFSD11O43934 449 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 LATS1O95835 1130 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 SCARB2Q14108 478 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 GDPD4Q6W3E5 623 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 GRASPQ7Z6J2 395 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-201ENST00000356083 SLC51AQ86UW1 340 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 INHAP05111 366 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 TIGARQ9NQ88 270 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 MYO7AQ13402 2215 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 CAPN8A6NHC0 703 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 MRPL3P09001 348 aaKnown RBP16.8■□□□□ 0.28
COL27A1-201ENST00000356083 S100PP25815 95 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 PQLC1Q8N2U9 271 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 SUN5Q8TC36 379 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 ANKRD7Q92527 254 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 SLC2A2P11168 524 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-201ENST00000356083 NRIP1P48552 1158 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 EXOC3L2Q2M3D2 409 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 CAMKVQ8NCB2 501 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 LRRC58Q96CX6 371 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 PCDHGA11Q9Y5H2 935 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 MEIS2O14770 477 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 EARS2Q5JPH6 523 aaKnown RBP16.8■□□□□ 0.28
COL27A1-201ENST00000356083 IGFN1Q86VF2 1251 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 KCTD15Q96SI1 283 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF175Q9Y473 711 aa16.8■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF670-ZNF695F2Z2N8 137 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ABLIM1O14639 778 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 MMP20O60882 483 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SSTP61278 116 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 NNATQ16517 81 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SLITRK4Q8IW52 837 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 OR10T2Q8NGX3 314 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 BORCS5Q969J3 196 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 DNAJC27Q9NZQ0 273 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 SLC38A8A6NNN8 435 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 PIP5K1BO14986 540 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 CRISP3P54108 245 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 RHBDL3P58872 404 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 KDELC1Q6UW63 502 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ANKRA2Q9H9E1 313 aa16.79■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF282Q9UDV7 671 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 PRPF19Q9UMS4 504 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 TDRD6O60522 2096 aaKnown RBP16.79■□□□□ 0.28
COL27A1-201ENST00000356083 TRMUO75648 421 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms