RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 SUN5Q8TC36 379 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 HIST1H2AHQ96KK5 128 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 HIST1H2AJQ99878 128 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 H2AFJQ9BTM1 129 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 MOV10Q9HCE1 1003 aaKnown RBP13.19□□□□□ -0.3
TRIM4-203ENST00000355947 TM9SF3Q9HD45 589 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 TMEM184CQ9NVA4 438 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 OSGIN1Q9UJX0 560 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 KCNH4Q9UQ05 1017 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 MYO7AQ13402 2215 aa13.19□□□□□ -0.3
TRIM4-203ENST00000355947 CCNDBP1O95273 360 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 NPPAP01160 153 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 CHRNB1P11230 501 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 CXCR2P25025 360 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 TNFSF8P32971 234 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 HTR2BP41595 481 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ABHD18Q0P651 414 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 VMACQ2NL98 169 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 HKDC1Q2TB90 917 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 PARP15Q460N3 678 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ELMOD1Q8N336 334 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 DIRAS2Q96HU8 199 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 MGLLQ99685 303 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 CPPED1Q9BRF8 314 aaPredicted RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 SP140LQ9H930 580 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ABCB8Q9NUT2 735 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 MUTYHQ9UIF7 546 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 FZD4Q9ULV1 537 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 PEX16Q9Y5Y5 336 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 CCDC182A6NF36 153 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ERN1O75460 977 aaKnown RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 CCNYL3P0C7X3 344 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ADORA3P0DMS8 318 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 SGSHP51688 502 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ATN1P54259 1190 aaPredicted RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 TYSND1Q2T9J0 566 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 PTCHD3Q3KNS1 767 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 LEXMQ3ZCV2 418 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 FAM171BQ6P995 826 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 SNX20Q7Z614 316 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 TSPYL5Q86VY4 417 aaPredicted RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ENKURQ8TC29 256 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 NIPSNAP1Q9BPW8 284 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ASPNQ9BXN1 380 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 IL1RAPQ9NPH3 570 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 RPS6KA6Q9UK32 745 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 CCDC88CQ9P219 2028 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 LRRTM2O43300 516 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 TSPAN19P0C672 248 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 LAMP1P11279 417 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 SDC1P18827 310 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 PBLDP30039 288 aaPredicted RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 SLC6A4P31645 630 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 C10orf62Q5T681 223 aaPredicted RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 NADSYN1Q6IA69 706 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 TYW3Q6IPR3 259 aaKnown RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 PNCKQ6P2M8 343 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 GALNT13Q8IUC8 556 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 KCNJ9Q92806 393 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 PKP4Q99569 1192 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 PRDM5Q9NQX1 630 aaPredicted RBP13.18□□□□□ -0.3
TRIM4-203ENST00000355947 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 LYVE1Q9Y5Y7 322 aa13.18□□□□□ -0.3
TRIM4-203ENST00000355947 ARID1BQ8NFD5 2236 aaPredicted RBP13.17□□□□□ -0.3
TRIM4-203ENST00000355947 A0A1W2PQ09 198 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 GJB5O95377 273 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 TRBC1P01850 177 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 ESR1P03372 595 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 RETP07949 1114 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 ANXA5P08758 320 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 PTNP21246 168 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 SUOXP51687 545 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 IRF8Q02556 426 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 ACSM2AQ08AH3 577 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 TUSC3Q13454 348 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 POM121L1PQ3SYA9 428 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 ACSM2BQ68CK6 577 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 ADNP2Q6IQ32 1131 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 UBE2R2Q712K3 238 aaPredicted RBP13.17□□□□□ -0.3
TRIM4-203ENST00000355947 PHF21AQ96BD5 680 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 CD244Q9BZW8 370 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 FBXO44Q9H4M3 255 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 TPT1P8Q9HAU6 139 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 UCKL1Q9NWZ5 548 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 PCDHGA6Q9Y5G7 932 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
TRIM4-203ENST00000355947 PTTG1O95997 202 aa13.17□□□□□ -0.3
TRIM4-203ENST00000355947 ITGALP20701 1170 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms