RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 SLIRPQ9GZT3 109 aaKnown RBP12.54□□□□□ -0.4
RNF220-202ENST00000355387 MMP27Q9H306 513 aa12.54□□□□□ -0.4
RNF220-202ENST00000355387 SP140LQ9H930 580 aa12.54□□□□□ -0.4
RNF220-202ENST00000355387 TRNAU1APQ9NX07 287 aaKnown RBP12.54□□□□□ -0.4
RNF220-202ENST00000355387 SIRT5Q9NXA8 310 aa12.54□□□□□ -0.4
RNF220-202ENST00000355387 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
RNF220-202ENST00000355387 KIF17Q9P2E2 1029 aa12.54□□□□□ -0.4
RNF220-202ENST00000355387 VPS29Q9UBQ0 182 aa12.54□□□□□ -0.4
RNF220-202ENST00000355387 HS3ST2Q9Y278 367 aa12.54□□□□□ -0.4
RNF220-202ENST00000355387 PMF1-BGLAPU3KQ54 211 aa12.54□□□□□ -0.4
RNF220-202ENST00000355387 TTC34A8MYJ7 566 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 SCAMP3O14828 347 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 WBP4O75554 376 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 MYO1DO94832 1006 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 SOD2P04179 222 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 CCR3P51677 355 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 SIM2Q14190 667 aaPredicted RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 GPR162Q16538 588 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 ATP13A5Q4VNC0 1218 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 TOR1AIP1Q5JTV8 583 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 LRRC66Q68CR7 880 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 GALNT5Q7Z7M9 940 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 TCEAL8Q8IYN2 117 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 NDNFQ8TB73 568 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 ATL1Q8WXF7 558 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 LMLNQ96KR4 655 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 HERC2P3Q9BVR0 1158 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 ADPRHL2Q9NX46 363 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 FAM32AQ9Y421 112 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 C1orf226A1L170 272 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 SAGE2PA6NJ88 616 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 SCAMP2O15127 329 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 ADAM23O75077 832 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 GSTM1P09488 218 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 BMP4P12644 408 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 ELNP15502 786 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 RPL17P18621 184 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 KRT20P35900 424 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 PPP5CP53041 499 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 PFN3P60673 137 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 PTSQ03393 145 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 ELP6Q0PNE2 266 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 PPP1R8Q12972 351 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 CAMK2GQ13555 558 aaPredicted RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 PLEKHG7Q6ZR37 379 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 DNAJB7Q7Z6W7 309 aaPredicted RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 TSPAN33Q86UF1 283 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 ASIC4Q96FT7 647 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 RAD9AQ99638 391 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 NXF2Q9GZY0 626 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 SCHIP1Q9P0W5 487 aaPredicted RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 CARNS1A5YM72 827 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 PRAMEF4O60810 478 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 SRPRAP08240 638 aaKnown RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 COX7A2P14406 83 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 ATP1B2P14415 290 aaPredicted RBP12.53□□□□□ -0.4
RNF220-202ENST00000355387 EPHB3P54753 998 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 LMAN2Q12907 356 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 INAQ16352 499 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 FBXO43Q4G163 708 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 DGKKQ5KSL6 1271 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 PRAMEF9Q5VWM5 478 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 RHOXF1Q8NHV9 184 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 COQ8BQ96D53 544 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 LGALS12Q96DT0 336 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 CPNE5Q9HCH3 593 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 RAD18Q9NS91 495 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
RNF220-202ENST00000355387 MYO1GB0I1T2 1018 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 ADAMDEC1O15204 470 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 SLCO2B1O94956 709 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 ZNF24P17028 368 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 ZNF30P17039 623 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 MAP2K4P45985 399 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 SPINT3P49223 89 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 KCNJ10P78508 379 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 SLC7A9P82251 487 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 CHIT1Q13231 466 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 KIAA1841Q6NSI8 718 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 TMEM53Q6P2H8 277 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 OR6K2Q8NGY2 324 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 GOT1L1Q8NHS2 421 aaPredicted RBP12.52□□□□□ -0.4
RNF220-202ENST00000355387 MYDGFQ969H8 173 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 TPT1P8Q9HAU6 139 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 IL21Q9HBE4 155 aa12.52□□□□□ -0.4
RNF220-202ENST00000355387 ZNF282Q9UDV7 671 aaPredicted RBP12.52□□□□□ -0.4
RNF220-202ENST00000355387 MN1Q10571 1320 aaPredicted RBP12.52□□□□□ -0.41
RNF220-202ENST00000355387 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.41
RNF220-202ENST00000355387 SRCP12931 536 aa12.52□□□□□ -0.41
RNF220-202ENST00000355387 PSMB9P28065 219 aa12.52□□□□□ -0.41
RNF220-202ENST00000355387 GGT2P36268 569 aa12.52□□□□□ -0.41
RNF220-202ENST00000355387 TMED10P49755 219 aaKnown RBP12.52□□□□□ -0.41
RNF220-202ENST00000355387 NEK2P51955 445 aa12.52□□□□□ -0.41
RNF220-202ENST00000355387 RPP38P78345 283 aaKnown RBP12.52□□□□□ -0.41
RNF220-202ENST00000355387 CCDC71Q8IV32 467 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms