RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 IGLV3-22A0A075B6J6 115 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SMCO3A2RU48 225 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 CNTN5O94779 1100 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 VNN1O95497 513 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MT-ND5P03915 603 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 NPY5RQ15761 445 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 NANOGP8Q6NSW7 305 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MTERF1Q99551 399 aaKnown RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SPATA9Q9BWV2 254 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 NANOGQ9H9S0 305 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PI15O43692 258 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 AGR2O95994 175 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 RFC2P35250 354 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR12D2P58182 307 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 S100A10P60903 97 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 TAF10Q12962 218 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PMS2P3Q13401 168 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ARFRP1Q13795 201 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 KANK2Q63ZY3 851 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ATG9BQ674R7 924 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MBOAT1Q6ZNC8 495 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 IQCHQ86VS3 1027 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 CACUL1Q86Y37 369 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PSMG2Q969U7 264 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 DERL2Q9GZP9 239 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MAF1Q9H063 256 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 FAM105AQ9NUU6 356 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MOCS1Q9NZB8 636 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCDHGC4Q9Y5F7 938 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ARL5AQ9Y689 179 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 NEURL4Q96JN8 1562 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 FLRT2O43155 660 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SEPT4O43236 478 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 KIAA0513O60268 411 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 H2AFB2P0C5Z0 115 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 FRG2Q64ET8 278 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 CARM1Q86X55 608 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC44A3Q8N4M1 653 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 FRG2BQ96QU4 278 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 A0A1B0GVM2 712 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 CMPK1P30085 196 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 AGTR1P30556 359 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 CEACAM7Q14002 265 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 GXYLT1Q4G148 440 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 WDR45BQ5MNZ6 344 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC25A25Q6KCM7 469 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SHQ1Q6PI26 577 aaKnown RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 TSPAN33Q86UF1 283 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 KBTBD6Q86V97 674 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 NXPE1Q8N323 547 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 LRCH3Q96II8 777 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 TSSK6Q9BXA6 273 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SEZ6LQ9BYH1 1024 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ASAH2Q9NR71 780 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 FAM118AQ9NWS6 357 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 GALPQ9UBC7 116 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ABCD2Q9UBJ2 740 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR1F1O43749 312 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PPM1BO75688 479 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PLATP00750 562 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 OAS1P00973 400 aaKnown RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 AVPR1BP47901 424 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC13A2Q13183 592 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 GRIK5Q16478 980 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF678Q5SXM1 525 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ATAD1Q8NBU5 361 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 FAM110BQ8TC76 370 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 SOCS4Q8WXH5 440 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 LPPQ93052 612 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MRM3Q9HC36 420 aaKnown RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 DNAJC27Q9NZQ0 273 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 C13orf42A0A1B0GVH6 325 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 FAM170BA6NMN3 283 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 J3QLW9 94 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 CACNB4O00305 520 aaPredicted RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 NARSO43776 548 aaKnown RBP12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 GNRH1P01148 92 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF19P17023 458 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 CYBRD1Q53TN4 286 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 DCDC5Q6ZRR9 648 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MINDY1Q8N5J2 469 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 COX18Q8N8Q8 333 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 MIR1-1HGQ9H1L0 117 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 TPT1P8Q9HAU6 139 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCDHGB2Q9Y5G2 931 aa12.37□□□□□ -0.43
SYNCRIP-201ENST00000355238 LOC100509620A0A075B734 347 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 DIRAS1O95057 198 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 RPP38P78345 283 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ST3GAL3Q11203 375 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms