RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 GAS8O95995 478 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 FTH1P02794 183 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 SP1P08047 785 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 PTGS2P35354 604 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 MEOX1P50221 254 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 GDF10P55107 478 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 POU6F1Q14863 301 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 DBN1Q16643 649 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 MAPKAPK3Q16644 382 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 RNFT1Q5M7Z0 435 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 SEL1L2Q5TEA6 688 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 TMEM205Q6UW68 189 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 CD163Q86VB7 1156 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 PRIMA1Q86XR5 153 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 PIANPQ8IYJ0 282 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 METTL21AQ8WXB1 218 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 RND1Q92730 232 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 HDAC10Q969S8 669 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 MMABQ96EY8 250 aaPredicted RBP14.99□□□□□ -0.01
DDX55-202ENST00000354291 C10orf90Q96M02 699 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 MIPEPQ99797 713 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 HRH3Q9Y5N1 445 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 TCRBV7S2A1N4TA0A589 114 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 MROH6A6NGR9 719 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 QSOX1O00391 747 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 PRPF4O43172 522 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX55-202ENST00000354291 PROM1O43490 865 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 NRP2O60462 931 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 ANXA5P08758 320 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 C8orf89P0DMQ9 161 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 ZNF24P17028 368 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 PSMA3P25788 255 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 ADSLP30566 484 aaPredicted RBP14.98□□□□□ -0.01
DDX55-202ENST00000354291 PTGER1P34995 402 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 PLOD1Q02809 727 aaPredicted RBP14.98□□□□□ -0.01
DDX55-202ENST00000354291 MEP1AQ16819 746 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 SYT16Q17RD7 645 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 DNAJC21Q5F1R6 531 aaKnown RBP14.98□□□□□ -0.01
DDX55-202ENST00000354291 SLC25A25Q6KCM7 469 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 CRLF3Q8IUI8 442 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 CLYBLQ8N0X4 340 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 OR2L8Q8NGY9 312 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 FAM57AQ8TBR7 257 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 MENTQ9BUN1 341 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 SLC24A3Q9HC58 644 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 MKKSQ9NPJ1 570 aaPredicted RBP14.98□□□□□ -0.01
DDX55-202ENST00000354291 ZNF358Q9NW07 568 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 CAPN6Q9Y6Q1 641 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 HCFC1P51610 2035 aa14.98□□□□□ -0.01
DDX55-202ENST00000354291 FN1P02751 2386 aaKnown RBP14.98□□□□□ -0.01
DDX55-202ENST00000354291 A0A1B0GTH9 108 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 CTAG2O75638 210 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 SUN1O94901 812 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 PSMB5P28074 263 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 FDFT1P37268 417 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 CDH17Q12864 832 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 CLEC9AQ6UXN8 241 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 HORMAD2Q8N7B1 307 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 LRRN4CLQ8ND94 238 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 ATG4AQ8WYN0 398 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 RMND5BQ96G75 393 aaPredicted RBP14.97□□□□□ -0.01
DDX55-202ENST00000354291 PWWP2AQ96N64 755 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 TGIF2Q9GZN2 237 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 PIH1D1Q9NWS0 290 aaKnown RBP14.97□□□□□ -0.01
DDX55-202ENST00000354291 LRFN1Q9P244 771 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 GNPTGQ9UJJ9 305 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 GUCA1BQ9UMX6 200 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 EDARQ9UNE0 448 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 ZNF148Q9UQR1 794 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 STAB1Q9NY15 2570 aa14.97□□□□□ -0.01
DDX55-202ENST00000354291 FAM237BA0A1B0GVD1 139 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 E7EVH7 732 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 H0YGG7 62 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 LIASO43766 372 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 MAN1A2O60476 641 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 CDC40O60508 579 aaKnown RBP eCLIP14.96□□□□□ -0.01
DDX55-202ENST00000354291 MSNP26038 577 aaKnown RBP14.96□□□□□ -0.01
DDX55-202ENST00000354291 SLC26A3P40879 764 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 EFNA3P52797 238 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 ARF3P61204 181 aaPredicted RBP14.96□□□□□ -0.01
DDX55-202ENST00000354291 HSPA14Q0VDF9 509 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 PMPCAQ10713 525 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 GRB7Q14451 532 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 ITIH4Q14624 930 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 OASLQ15646 514 aaKnown RBP14.96□□□□□ -0.01
DDX55-202ENST00000354291 MFSD4BQ5TF39 518 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 PLAG1Q6DJT9 500 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 H3F3CQ6NXT2 135 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 FBXO42Q6P3S6 717 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 CPEB2Q7Z5Q1 589 aaKnown RBP14.96□□□□□ -0.01
DDX55-202ENST00000354291 ZZZ3Q8IYH5 903 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 CPSF7Q8N684 471 aaKnown RBP14.96□□□□□ -0.01
DDX55-202ENST00000354291 AMER3Q8N944 861 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 OR52K1Q8NGK4 314 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 NUDT8Q8WV74 236 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 ALPK1Q96QP1 1244 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 CYTH2Q99418 400 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 TTC1Q99614 292 aa14.96□□□□□ -0.01
DDX55-202ENST00000354291 NPAS2Q99743 824 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms