RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 RPRD1BQ9NQG5 326 aaKnown RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 TVP23BQ9NYZ1 205 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 CFAP20Q9Y6A4 193 aaKnown RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 KIAA0513O60268 411 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 EPOP01588 193 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 BDKRB1P46663 353 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 SNRPD2P62316 118 aaKnown RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 PPP2R2BQ00005 443 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 NFE2L1Q14494 772 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 CTF1Q16619 201 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 ATP13A5Q4VNC0 1218 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 TJAP1Q5JTD0 557 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 LRRC66Q68CR7 880 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 KLHL17Q6TDP4 642 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 NAGSQ8N159 534 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 CELF5Q8N6W0 485 aaKnown RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 OR6Q1Q8NGQ2 317 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 STARD8Q92502 1023 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 SLC39A13Q96H72 371 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 CCNB1IP1Q9NPC3 277 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 PCDHB1Q9Y5F3 818 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 UPK1AO00322 258 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 KPNA3O00505 521 aaPredicted RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 CPNE3O75131 537 aaKnown RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 PRLP01236 227 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 HTR7P34969 479 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 SLC15A1P46059 708 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 XKR4Q5GH76 650 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 DDI2Q5TDH0 399 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 TMEM173Q86WV6 379 aaPredicted RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 FOPNLQ96NB1 174 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 PAQR5Q9NXK6 330 aaPredicted RBP17.48■□□□□ 0.39
CTSB-202ENST00000353047 COQ3Q9NZJ6 369 aa17.48■□□□□ 0.39
CTSB-202ENST00000353047 CAPNS1P04632 268 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 SPNP16150 400 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 SPAM1P38567 509 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 MC1RQ01726 317 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 OXA1LQ15070 435 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 XKR7Q5GH72 579 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 PRSS36Q5K4E3 855 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 DEPDC4Q8N2C3 294 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 GLB1L3Q8NCI6 653 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 UPF1Q92900 1129 aaKnown RBP eCLIP17.47■□□□□ 0.392e-29■■■■■ 151.5
CTSB-202ENST00000353047 SLC32A1Q9H598 525 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 TBC1D14Q9P2M4 693 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 GABRQQ9UN88 632 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 FAM25AB3EWG3 89 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 FAM25CB3EWG5 89 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 FAM25GB3EWG6 89 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 PLOD3O60568 738 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 PPP5CP53041 499 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 HSPB3Q12988 150 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 ZC3H12BQ5HYM0 836 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 ADGRF1Q5T601 910 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 USP50Q70EL3 339 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 RIMKLAQ8IXN7 391 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 CMTM8Q8IZV2 173 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 TSPEARQ8WU66 669 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 WRAP53Q9BUR4 548 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 STARD7Q9NQZ5 370 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 RLIMQ9NVW2 624 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 LYVE1Q9Y5Y7 322 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 LY75O60449 1722 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 TAPBPO15533 448 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 IGSF6O95976 241 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 C7P10643 843 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 SRP54P61011 504 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 SETMARQ53H47 684 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 NEK5Q6P3R8 708 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 RSPO2Q6UXX9 243 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 SHFQ7M4L6 423 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 AQP11Q8NBQ7 271 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 C11orf65Q8NCR3 313 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 XAGE5Q8WWM1 108 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 SLC38A4Q969I6 547 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 POLR2J2Q9GZM3 115 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 ATP6V1HQ9UI12 483 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 NEU3Q9UQ49 428 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 LZTS3O60299 673 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 DUSP11O75319 330 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 CH25HO95992 272 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 BPIP17213 487 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 RNF144AP50876 292 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 CRISP3P54108 245 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 FCGRTP55899 365 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 RACK1P63244 317 aaKnown RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 MAD2L1BPQ15013 274 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 EXOC3L2Q2M3D2 409 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 CLLU1OSQ5K130 101 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 TMPRSS11AQ6ZMR5 421 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 SLC16A12Q6ZSM3 486 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 HJURPQ8NCD3 748 aaPredicted RBP17.47■□□□□ 0.39
CTSB-202ENST00000353047 RHBDF1Q96CC6 855 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 IL17CQ9P0M4 197 aa17.47■□□□□ 0.39
CTSB-202ENST00000353047 UGT2A1Q9Y4X1 527 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms