RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 IKZF5Q9H5V7 419 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 NT5DC2Q9H857 520 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 RMND5AQ9H871 391 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GORASP2Q9H8Y8 452 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PELI2Q9HAT8 420 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 WASH6PQ9NQA3 447 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 DMRT3Q9NQL9 472 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 CCDC177Q9NQR7 707 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 TM7SF3Q9NS93 570 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SLC6A13Q9NSD5 602 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 EGFL7Q9UHF1 273 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 MAGEL2Q9UJ55 1249 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 USP22Q9UPT9 525 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 MAPRE3Q9UPY8 281 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 EXO1Q9UQ84 846 aaKnown RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 OR1A2Q9Y585 309 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PIAS3Q9Y6X2 628 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 FLNBO75369 2602 aaKnown RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 A6NHS1 94 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 FAM220BPB1ANY3 271 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 YY2O15391 372 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 TIPRLO75663 272 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MYO1DO94832 1006 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 SCELO95171 688 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ANXA6P08133 673 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ZCCHC18P0CG32 403 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MTHFD1P11586 935 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 FCGR1AP12314 374 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 FOSL2P15408 326 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 NCK1P16333 377 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 IL1RNP18510 177 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 IL10P22301 178 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 OXTRP30559 389 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 TIA1P31483 386 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 CDKN2CP42773 168 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 KIR3DL1P43629 444 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ASMTP46597 345 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 CLCN2P51788 898 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 CLCNKAP51800 687 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 RPS13P62277 151 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 PPP2CBP62714 309 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 PPP2CAP67775 309 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MRPS35P82673 323 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 REEP5Q00765 189 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 KLC1Q07866 573 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MLF2Q15773 248 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 HIST2H2ACQ16777 129 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 DUOXA1Q1HG43 343 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 GRAMD1BQ3KR37 738 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 FBXO43Q4G163 708 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MTX3Q5HYI7 312 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 IER5LQ5T953 404 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 HIST2H2AA3Q6FI13 130 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 GLYATQ6IB77 296 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 OR4F3Q6IEY1 312 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 PPP4R4Q6NUP7 873 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ARMCX6Q7L4S7 300 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 LPCAT2Q7L5N7 544 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 GPR180Q86V85 440 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 IFNEQ86WN2 208 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 TRIM69Q86WT6 500 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 SYT12Q8IV01 421 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 METTL4Q8N3J2 472 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MARVELD2Q8N4S9 558 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 C1orf52Q8N6N3 182 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 DENND6BQ8NEG7 585 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 OR4K1Q8NGD4 311 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 FAM110BQ8TC76 370 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 GANCQ8TET4 914 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 SMPDL3AQ92484 453 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 NELL1Q92832 810 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 KLK6Q92876 244 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 BIRC7Q96CA5 298 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 CXorf40BQ96DE9 158 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 SIPA1Q96FS4 1042 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MSANTD3Q96H12 275 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 MRGPRX1Q96LB2 322 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF597Q96LX8 424 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 INSM2Q96T92 566 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 EBPLQ9BY08 206 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 PITHD1Q9GZP4 211 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 REXO4Q9GZR2 422 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 PCBD2Q9H0N5 130 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 TTYH1Q9H313 450 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 TRIT1Q9H3H1 467 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 KAT8Q9H7Z6 458 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 KCNK12Q9HB15 430 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 C11orf16Q9NQ32 467 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 AGPAT4Q9NRZ5 378 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 FAM120CQ9NX05 1096 aaKnown RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ADGRE2Q9UHX3 823 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ATP6V1HQ9UI12 483 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 BTNL2Q9UIR0 455 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ANAPC2Q9UJX6 822 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 RAB26Q9ULW5 256 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 ERVK-11Q9UQG0 969 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 BTBD3Q9Y2F9 522 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 WDR37Q9Y2I8 494 aa6.66□□□□□ -1.34
TRIM55-203ENST00000350034 PCDHB14Q9Y5E9 798 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms