RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 EFCAB11Q9BUY7 163 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 EHD1Q9H4M9 534 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 BRF2Q9HAW0 419 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 DMRT3Q9NQL9 472 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 GID8Q9NWU2 228 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 EXO1Q9UQ84 846 aaKnown RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 FANCMQ8IYD8 2048 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 ARHGAP10A1A4S6 786 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 LCMT2O60294 686 aaKnown RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 FKBP6O75344 327 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 GSNP06396 782 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 GSK3BP49841 420 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 SRP54P61011 504 aaKnown RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 CYP4F2P78329 520 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ARHGAP19Q14CB8 494 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 KIAA0895LQ68EN5 471 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 LRRC74BQ6ZQY2 392 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 HID1Q8IV36 788 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 SIX5Q8N196 739 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 TSTD1Q8NFU3 115 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 CDC26Q8NHZ8 85 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 SH3KBP1Q96B97 665 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 AURKBQ96GD4 344 aaPredicted RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 MAGEB10Q96LZ2 347 aaPredicted RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 OR52E6Q96RD3 313 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 TMEM45AQ9NWC5 275 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 KLHL20Q9Y2M5 609 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 LRP4O75096 1905 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 PLXND1Q9Y4D7 1925 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ABCA7Q8IZY2 2146 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 TDRD6O60522 2096 aaKnown RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 KLHL33A6NCF5 533 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 APBB3O95704 486 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 RPN2P04844 631 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 PRPS2P11908 318 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 AKT2P31751 481 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ACTR1BP42025 376 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ACTR1AP61163 376 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 AP2B1P63010 937 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ACSM2AQ08AH3 577 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 RBBP5Q15291 538 aaKnown RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 MAPKAPK3Q16644 382 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 PGS1Q32NB8 556 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ACSM2BQ68CK6 577 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 OR4F3Q6IEY1 312 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 AAGABQ6PD74 315 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ABRAXAS1Q6UWZ7 409 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 TMIGD1Q6UXZ0 262 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ABI3BPQ7Z7G0 1075 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 SPATA24Q86W54 205 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 C17orf64Q86WR6 236 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 SYT12Q8IV01 421 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDC42-202ENST00000344548 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 SMPDL3AQ92484 453 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 MIEF2Q96C03 454 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 CGREF1Q99674 301 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 PRM3Q9NNZ6 103 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.05□□□□□ -0.32
CDC42-202ENST00000344548 TMED5Q9Y3A6 229 aa13.05□□□□□ -0.32
CDC42-202ENST00000344548 A6NCN8 305 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 PRICKLE3O43900 615 aaPredicted RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 STATHP02808 62 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 NCK1P16333 377 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 PTPN6P29350 595 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 PKLRP30613 574 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 SLC19A1P41440 591 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 RAB28P51157 221 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 WNT3P56703 355 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 MLLT1Q03111 559 aaPredicted RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 LIPEQ05469 1076 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 ZNF33BQ06732 778 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 SFSWAPQ12872 951 aaKnown RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 PWP1Q13610 501 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 LRRC36Q1X8D7 754 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 HKDC1Q2TB90 917 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 FBXL6Q8N531 539 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 JADE3Q92613 823 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 NMRK1Q9NWW6 199 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 SPATA7Q9P0W8 599 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 STOML1Q9UBI4 398 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 RTCAO00442 366 aaKnown RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 PPM1DO15297 605 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 SCN2BO60939 215 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 IL6P05231 212 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 ANXA4P09525 319 aaPredicted RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 PIM1P11309 404 aaPredicted RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 MAOBP27338 520 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 HTR1BP28222 390 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 CD6P30203 668 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 OR4D2P58180 307 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 STARD6P59095 220 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 CSNK1G2P78368 415 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 PRKCQQ04759 706 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 ZP2Q05996 745 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms