RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OR7G3Q8NG95 312 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 OR13F1Q8NGS4 319 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 ATL1Q8WXF7 558 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 SNX19Q92543 992 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 FOPNLQ96NB1 174 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 HHIPQ96QV1 700 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 DUSP26Q9BV47 211 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 SH2B3Q9UQQ2 575 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 CEP290O15078 2479 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 SLC5A10A0PJK1 596 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 GABRR3A8MPY1 467 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 H3BM21 787 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 MAN1A2O60476 641 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 CPNE6O95741 557 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 EPHA5P54756 1037 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 EMP3P54852 163 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 RAE1P78406 368 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 VLDLRP98155 873 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 EPS8Q12929 822 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 KCNC3Q14003 757 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 DHCR24Q15392 516 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 LAIR2Q6ISS4 152 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 PDE12Q6L8Q7 609 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 CYP4Z1Q86W10 505 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 SPARTQ8N0X7 666 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 VN1R2Q8NFZ6 395 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 HDAC2Q92769 488 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 GLMNQ92990 594 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 HSH2DQ96JZ2 352 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 OR2AG1Q9H205 316 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 C11orf49Q9H6J7 331 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 WARS2Q9UGM6 360 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 NOTCH4Q99466 2003 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 ZNF701M0R085 212 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 SCAMP2O15127 329 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 XPNPEP2O43895 674 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 UGDHO60701 494 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 HTR1AP08908 422 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 KDELR2P33947 212 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 RAD23AP54725 363 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 MEF2AQ02078 507 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 RAPSNQ13702 412 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 MYBPC3Q14896 1274 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 SKIV2LQ15477 1246 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 DPY19L1Q2PZI1 675 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 CPTPQ5TA50 214 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 OR2T5Q6IEZ7 315 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 RASGRP3Q8IV61 690 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 HOMEZQ8IX15 550 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 OR2T29Q8NH02 315 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 ZNF420Q8TAQ5 688 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 ZFYVE19Q96K21 471 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 FCRL1Q96LA6 429 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 TPT1P8Q9HAU6 139 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 BAG5Q9UL15 447 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 PTPRSQ13332 1948 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 MGAT4DA6NG13 374 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 NPIPB8E9PQR5 432 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 NPC1O15118 1278 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 FABP3P05413 133 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 ZNF182P17025 639 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 HNF4AP41235 474 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 ST8SIA6P61647 398 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 TBPL1P62380 186 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 BNIP3Q12983 259 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 GAB1Q13480 694 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 SHQ1Q6PI26 577 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 XKR5Q6UX68 686 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 HORMAD1Q86X24 394 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 C2orf73Q8N5S3 287 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 EZH1Q92800 747 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 NXPE3Q969Y0 559 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 MAGEB10Q96LZ2 347 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 ZDHHC4Q9NPG8 344 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 IL1RAPQ9NPH3 570 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 FAM120CQ9NX05 1096 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 GULP1Q9UBP9 304 aa14.37□□□□□ -0.11
VIPAS39-202ENST00000343765 TSPAN11A1L157 253 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 ANTXRLA6NF34 631 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 H0YIV9 168 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 QSOX1O00391 747 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 CYP17A1P05093 508 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 MAGEA2P43356 314 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 ISL1P61371 349 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 TMED1Q13445 227 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 ZNF691Q5VV52 312 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 CRTC3Q6UUV7 619 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 MSANTD1Q6ZTZ1 278 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 ZC3H7AQ8IWR0 971 aaKnown RBP14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 ZNF557Q8N988 423 aaPredicted RBP14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 OR4K1Q8NGD4 311 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 OR8J2Q8NGG1 315 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 ZNF480Q8WV37 535 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 HSPBAP1Q96EW2 488 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 PREBQ9HCU5 417 aa14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 PAK1IP1Q9NWT1 392 aaPredicted RBP14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 PDP1Q9P0J1 537 aaPredicted RBP14.36□□□□□ -0.11
VIPAS39-202ENST00000343765 FZD4Q9ULV1 537 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms