RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SYNPOQ8N3V7 929 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ELMO1Q92556 727 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ZFYVE19Q96K21 471 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 FYTTD1Q96QD9 318 aaKnown RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 KCNS3Q9BQ31 491 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 BARHL1Q9BZE3 327 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ROGDIQ9GZN7 287 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 NIPAL2Q9H841 368 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 STMN3Q9NZ72 180 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 SCML2Q9UQR0 700 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 PCDHB1Q9Y5F3 818 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 A0A0B4J293 547 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 IQCMA0A1B0GVH7 501 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 EFCAB10A6NFE3 127 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 M0QZQ0 153 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 GPR182O15218 404 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 CR2P20023 1033 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 PTX3P26022 381 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 HOXD9P28356 352 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 HTR2BP41595 481 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 NUDT6P53370 316 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 EFR3AQ14156 821 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 TSTQ16762 297 aaKnown RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 DUOXA1Q1HG43 343 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 HKDC1Q2TB90 917 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 GLYR1Q49A26 553 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 CD300LGQ6UXG3 332 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 TMPRSS11AQ6ZMR5 421 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 TSEN54Q7Z6J9 526 aaKnown RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ZNF605Q86T29 641 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ANKRD46Q86W74 232 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 CCDC28AQ8IWP9 274 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 ELMOD2Q8IZ81 293 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 EFHBQ8N7U6 833 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 RNF31Q96EP0 1072 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 MGLLQ99685 303 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 PAAF1Q9BRP4 392 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 AMBNQ9NP70 447 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 PIM2Q9P1W9 311 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 UBA2Q9UBT2 640 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 KLHL21Q9UJP4 597 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 SNX7Q9UNH6 387 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 POFUT2Q9Y2G5 429 aa9.36□□□□□ -0.91
HOXA1-201ENST00000343060 TRIP12Q14669 1992 aaPredicted RBP9.36□□□□□ -0.91
HOXA1-201ENST00000343060 CASTOR2A6NHX0 329 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 B4DXG7 233 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 CLIC1O00299 241 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ADRA2AP08913 450 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 PIPP12273 146 aaPredicted RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 NAT1P18440 290 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 SDC1P18827 310 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 IFNA8P32881 189 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 OR3A3P47888 321 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ALDH9A1P49189 494 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 DOC2BQ14184 412 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 C5orf22Q49AR2 442 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ZMAT1Q5H9K5 638 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 CCDC149Q6ZUS6 474 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 GALNT10Q86SR1 603 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 MON1AQ86VX9 555 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 GPR151Q8TDV0 419 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 BTN2A2Q8WVV5 523 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 BHMTQ93088 406 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 FCRL1Q96LA6 429 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 OPALINQ96PE5 141 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 PSKH2Q96QS6 385 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 OR5M11Q96RB7 305 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 TTLL2Q9BWV7 592 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 CHST8Q9H2A9 424 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 TMEM245Q9H330 911 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 SARS2Q9NP81 518 aaKnown RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 NUFIP1Q9UHK0 495 aaKnown RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 SH3D21A4FU49 640 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 IQCF5A8MTL0 148 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 LOC730098B7Z3J9 87 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 NT5C1B-RDH14C9J2C7 533 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 POLR1CO15160 346 aaPredicted RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 SHOXO15266 292 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 EPN2O95208 641 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 IGLV3-27P01718 113 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ANXA8P13928 327 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ENGP17813 658 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 RPS3P23396 243 aaKnown RBP eCLIP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 CHMP24386 653 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 GZMKP49863 264 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 TSPY1Q01534 308 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 SCN1BQ07699 218 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 FAPQ12884 760 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 BOP1Q14137 746 aaKnown RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 ARHGEF6Q15052 776 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 GGTA1PQ4G0N0 100 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 PDE12Q6L8Q7 609 aaKnown RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 CIR1Q86X95 450 aaPredicted RBP9.35□□□□□ -0.91
HOXA1-201ENST00000343060 SLC38A6Q8IZM9 456 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 B3GNT7Q8NFL0 401 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 COQ8BQ96D53 544 aa9.35□□□□□ -0.91
HOXA1-201ENST00000343060 C8orf48Q96LL4 319 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms