RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PDE10AQ9Y233 779 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 TMED5Q9Y3A6 229 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 KCTD3Q9Y597 815 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 PCDHGA3Q9Y5H0 932 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 OPN1SWP03999 348 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 NPY5RQ15761 445 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 IQCCQ4KMZ1 466 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 CPNE8Q86YQ8 564 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 ZSCAN4Q8NAM6 433 aaPredicted RBP14.58□□□□□ -0.07
UBE3B-202ENST00000342494 LRRC46Q96FV0 321 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 B3GNT4Q9C0J1 378 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 ACTL8Q9H568 366 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 GRHL1Q9NZI5 618 aa14.58□□□□□ -0.07
UBE3B-202ENST00000342494 A0A0D9SEW6 157 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 TEX46H3BTG2 121 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 SLC22A2O15244 555 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 TBX1O43435 398 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 CHP2O43745 196 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 TXNRD3NBQ6F5E7 133 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 NIPAL1Q6NVV3 410 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 GOLGA7Q7Z5G4 137 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 METTL27Q8N6F8 245 aaPredicted RBP14.58□□□□□ -0.08
UBE3B-202ENST00000342494 GEMIN6Q8WXD5 167 aaKnown RBP14.58□□□□□ -0.08
UBE3B-202ENST00000342494 GPR34Q9UPC5 381 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 A0A1W2PRG6 482 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 TRMUO75648 421 aaKnown RBP14.58□□□□□ -0.08
UBE3B-202ENST00000342494 RPS13P62277 151 aaKnown RBP14.58□□□□□ -0.08
UBE3B-202ENST00000342494 UPP1Q16831 310 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 OR4F6Q8NGB9 312 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 ADAD1Q96M93 576 aaKnown RBP14.58□□□□□ -0.08
UBE3B-202ENST00000342494 NPY6RQ99463 290 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 ARHGAP39Q9C0H5 1083 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 NKX2-4Q9H2Z4 354 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 MANBAO00462 879 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 RCBTB2O95199 551 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 CDH1P12830 882 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 CASP6P55212 293 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 SELENOVP59797 346 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 DSC3Q14574 896 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 SLC39A4Q6P5W5 647 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 FBXO46Q6PJ61 603 aaPredicted RBP14.58□□□□□ -0.08
UBE3B-202ENST00000342494 ARMC10Q8N2F6 343 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 SMARCD2Q92925 531 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 COPS4Q9BT78 406 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 AKTIPQ9H8T0 292 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 TRIM39Q9HCM9 518 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 RIMKLBQ9ULI2 386 aa14.58□□□□□ -0.08
UBE3B-202ENST00000342494 PIRO00625 290 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 GJB5O95377 273 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 H1F0P07305 194 aaKnown RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 F7P08709 466 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 GSTM3P21266 225 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 CCNOP22674 350 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 INCA1Q0VD86 236 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF267Q14586 743 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ABCA11PQ4W5N1 156 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 FITM2Q8N6M3 262 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 PHF12Q96QT6 1004 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ELAC1Q9H777 363 aaKnown RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 TCRBV7S3A2A0A539 114 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 TRBC2A0A5B9 178 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 SOCS5O75159 536 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 CYP17A1P05093 508 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 PGAM2P15259 253 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 PAX7P23759 505 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ECHS1P30084 290 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 STC1P52823 247 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 JAG1P78504 1218 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ZMYND11Q15326 602 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 SYT16Q17RD7 645 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 DUOXA1Q1HG43 343 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 CEACAM20Q6UY09 585 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 PDPRQ8NCN5 879 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 PKP4Q99569 1192 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 HCN2Q9UL51 889 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 AHSGP02765 367 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 CSTBP04080 98 aaKnown RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 LGI4Q8N135 537 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 KLHL36Q8N4N3 616 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 DNAJA4Q8WW22 397 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 GORASP1Q9BQQ3 440 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 GPR62Q9BZJ7 368 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 PDE7BQ9NP56 450 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 LYARQ9NX58 379 aaKnown RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 EME2A4GXA9 379 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 SHOX2O60902 331 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 KAT7O95251 611 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 GRIA2P42262 883 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 VSX2P58304 361 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 IDNKQ5T6J7 187 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 LINGO2Q7L985 606 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 TMCO2Q7Z6W1 182 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 GIN1Q9NXP7 522 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 PCDHGA2Q9Y5H1 932 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 TSPAN6O43657 245 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 RNGTTO60942 597 aaKnown RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ITGA10O75578 1167 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ETS2P15036 469 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 AZGP1P25311 298 aaKnown RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ID2Q02363 134 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms