RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 NME6O75414 186 aaPredicted RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 UGT2B17O75795 530 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CAPN15O75808 1086 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 TCF3P15923 654 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 PPIBP23284 216 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CCT3P49368 545 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 DUS1LQ6P1R4 473 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC22A17Q8WUG5 538 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 TBX5Q99593 518 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 SP140LQ9H930 580 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CORINQ9Y5Q5 1042 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 TRAV19A0A0A6YYK7 116 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 A0A1W2PRB8 838 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 PLK4O00444 970 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 C6orf47O95873 294 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 ALPLP05186 524 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CCND3P30281 292 aaPredicted RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 WASP42768 502 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 SSR2P43308 183 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 ASMTP46597 345 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 RPS13P62277 151 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 GPR17Q13304 367 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 SLBPQ14493 270 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 ATP13A5Q4VNC0 1218 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CYP4Z2PQ8N1L4 340 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CD99L2Q8TCZ2 262 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF675Q8TD23 568 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CYB5D2Q8WUJ1 264 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 RELTQ969Z4 430 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 RIOK2Q9BVS4 552 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 YIPF2Q9BWQ6 316 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 POPDC3Q9HBV1 291 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 CORO2BQ9UQ03 480 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 TMEM88BA6NKF7 163 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 NPPAP01160 153 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 EIF2S1P05198 315 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 LAMP1P11279 417 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 MAPK12P53778 367 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 RAB15P59190 212 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 GPRC6AQ5T6X5 926 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SMARCD3Q6STE5 483 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 DSG4Q86SJ6 1040 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ANKRD13BQ86YJ7 626 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 NXPE1Q8N323 547 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF583Q96ND8 569 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 RNF38Q9H0F5 515 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SUV39H2Q9H5I1 410 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ARNT2Q9HBZ2 717 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TM9SF3Q9HD45 589 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 RAD18Q9NS91 495 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 RIMKLBQ9ULI2 386 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ABCG2Q9UNQ0 655 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 CPSF4LA6NMK7 179 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 CCRL2O00421 344 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SMAD6O43541 496 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TLX2O43763 284 aaPredicted RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 BCHEP06276 602 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF865P0CJ78 1059 aaPredicted RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 PSKH1P11801 424 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ETFAP13804 333 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC6A4P31645 630 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 RAB14P61106 215 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 C9orf64Q5T6V5 341 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 MTSS1LQ765P7 747 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 Q8N9G6 341 aaPredicted RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 MYLIPQ8WY64 445 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF558Q96NG5 402 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 DSN1Q9H410 356 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ZDHHC3Q9NYG2 299 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SLCO3A1Q9UIG8 710 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 WDR37Q9Y2I8 494 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TARM1B6A8C7 271 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 FXYD1O00168 92 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 CCL16O15467 120 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TPD52L2O43399 206 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ATG13O75143 517 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 PDE9AO76083 593 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 CLTBP09497 229 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 GSTT2P0CG29 244 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 GSTT2BP0CG30 244 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TAS2R50P59544 299 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 CDK6Q00534 326 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SCN1BQ07699 218 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ATAD3BQ5T9A4 648 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 AGTRAPQ6RW13 159 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 COLGALT2Q8IYK4 626 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TCEANCQ8N8B7 351 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF671Q8TAW3 534 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 GTF2H4Q92759 462 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 ZCCHC2Q9C0B9 1178 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 KCNH6Q9H252 994 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 GABRQQ9UN88 632 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SATB2Q9UPW6 733 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TBC1D3BA6NDS4 549 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 STK25O00506 426 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 CPNE3O75131 537 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 EOMESO95936 686 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms