RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 COG8Q96MW5 612 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 FUNDC2Q9BWH2 189 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 WDR37Q9Y2I8 494 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 ZNF451Q9Y4E5 1061 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 SCN1AP35498 2009 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 ATG2BQ96BY7 2078 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 DOCK3Q8IZD9 2030 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 ZW10O43264 779 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 BPIP17213 487 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 RBM48Q5RL73 367 aaKnown RBP13.12□□□□□ -0.31
TMEM248-201ENST00000341567 FRG2Q64ET8 278 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 HDDC2Q7Z4H3 204 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 SVOPLQ8N434 492 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 METTL25Q8N6Q8 603 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 BPIFB1Q8TDL5 484 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 FRG2BQ96QU4 278 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 CLEC4MQ9H2X3 399 aaPredicted RBP13.12□□□□□ -0.31
TMEM248-201ENST00000341567 XKR8Q9H6D3 395 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 C11orf16Q9NQ32 467 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 SPHK2Q9NRA0 654 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 CASKO14936 926 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 INMTO95050 263 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
TMEM248-201ENST00000341567 PTSQ03393 145 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 TGM3Q08188 693 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 AGTRAPQ6RW13 159 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 RFLNAQ6ZTI6 216 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 C16orf62Q7Z3J2 963 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 ZNF420Q8TAQ5 688 aaPredicted RBP13.12□□□□□ -0.31
TMEM248-201ENST00000341567 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 KXD1Q9BQD3 176 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 TRMT61BQ9BVS5 477 aaKnown RBP13.12□□□□□ -0.31
TMEM248-201ENST00000341567 SLC32A1Q9H598 525 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 TAC3Q9UHF0 121 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 PGRP06401 933 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 RYKP34925 604 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 MAGEA10P43363 369 aaPredicted RBP13.12□□□□□ -0.31
TMEM248-201ENST00000341567 ACADVLP49748 655 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 INHBCP55103 352 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 OR2B6P58173 313 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 PHC1P78364 1004 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 GANABQ14697 944 aaKnown RBP13.12□□□□□ -0.31
TMEM248-201ENST00000341567 FGD2Q7Z6J4 655 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 DEFB119Q8N690 84 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 TMEM145Q8NBT3 493 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 ZUFSPQ96AP4 578 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 RAD51AP1Q96B01 352 aa13.12□□□□□ -0.31
TMEM248-201ENST00000341567 SAGE2PA6NJ88 616 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 KLK1P06870 262 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 NR2F6P10588 404 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 ACTR1BP42025 376 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 ACTR1AP61163 376 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 GALNT13Q8IUC8 556 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 USP7Q93009 1102 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 UBE2E3Q969T4 207 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 LMLNQ96KR4 655 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 AIF1LQ9BQI0 150 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 NUSAP1Q9BXS6 441 aaKnown RBP13.11□□□□□ -0.31
TMEM248-201ENST00000341567 SP140LQ9H930 580 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 IL26Q9NPH9 171 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 FARSBQ9NSD9 589 aaKnown RBP13.11□□□□□ -0.31
TMEM248-201ENST00000341567 PTGFRNQ9P2B2 879 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 ERVK-18Q9QC07 812 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 DHRS7Q9Y394 339 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 MAGEB17A8MXT2 336 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 CCRL2O00421 344 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 PORP16435 677 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-201ENST00000341567 IDSP22304 550 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 FSHRP23945 695 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 CXCR2P25025 360 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 NCS1P62166 190 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 OLR1P78380 273 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 TMEM115Q12893 351 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-201ENST00000341567 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 TPRG1LQ5T0D9 272 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 IER5LQ5T953 404 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 TRIM40Q6P9F5 258 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 PGBD5Q8N414 524 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 NUS1Q96E22 293 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 CARS2Q9HA77 564 aaKnown RBP13.11□□□□□ -0.31
TMEM248-201ENST00000341567 ZNF334Q9HCZ1 680 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-201ENST00000341567 TBCCD1Q9NVR7 557 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 CMTM6Q9NX76 183 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 VPS29Q9UBQ0 182 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 ENOPH1Q9UHY7 261 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 NPIPB15A6NHN6 443 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-201ENST00000341567 A8MU76 341 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 CREG1O75629 220 aa13.11□□□□□ -0.31
TMEM248-201ENST00000341567 OPRL1P41146 370 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms