RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 OR2T11Q8NH01 316 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 WDR48Q8TAF3 677 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 NEIL2Q969S2 332 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 COQ8BQ96D53 544 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 C3orf30Q96M34 536 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 ANKRD27Q96NW4 1050 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 LRRC61Q9BV99 259 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 ATAD3AQ9NVI7 634 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 TAS2R7Q9NYW3 318 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 ZNF624Q9P2J8 865 aaPredicted RBP6.9□□□□□ -1.3
NUP43-201ENST00000340413 WDR37Q9Y2I8 494 aa6.9□□□□□ -1.3
NUP43-201ENST00000340413 FANCMQ8IYD8 2048 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 A0A088AWK7 358 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 GSC2O15499 205 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 VIPP01282 170 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 ABCB1P08183 1280 aaPredicted RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 ALPPL2P10696 532 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 NCF2P19878 526 aaPredicted RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 ZNF10P21506 573 aaPredicted RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 VARSP26640 1264 aaKnown RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 ACTR1BP42025 376 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 CCR10P46092 362 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 ZFP36L2P47974 494 aaKnown RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 ACTR1AP61163 376 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 STXBP1P61764 594 aaKnown RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 SKP1P63208 163 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 CSNK1G2P78368 415 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 GPLD1P80108 840 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 SLBPQ14493 270 aaKnown RBP eCLIP6.9□□□□□ -1.31
NUP43-201ENST00000340413 C6orf132Q5T0Z8 1188 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 CYP20A1Q6UW02 462 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 OR2L3Q8NG85 312 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.9□□□□□ -1.31
NUP43-201ENST00000340413 FAM136AQ96C01 138 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 TBCDQ9BTW9 1192 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 WDR55Q9H6Y2 383 aaPredicted RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 DDX31Q9H8H2 851 aaKnown RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 MRPS30Q9NP92 439 aaKnown RBP6.9□□□□□ -1.31
NUP43-201ENST00000340413 CPNE7Q9UBL6 633 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 PRDM4Q9UKN5 801 aa6.9□□□□□ -1.31
NUP43-201ENST00000340413 TMEM233B4DJY2 109 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 E9PBE3 544 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 GYG2O15488 501 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 AQP9O43315 295 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 NUDT21O43809 227 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 KLHL41O60662 606 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SOX30O94993 753 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 WNT1P04628 370 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 HSD17B1P14061 328 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 JUNDP17535 347 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 IL1RNP18510 177 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 CD22P20273 847 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 MAT2AP31153 395 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 POLR2JP52435 117 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 CLDN2P57739 230 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 ELOAQ14241 798 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 DEPDC1Q5TB30 811 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SLC23A3Q6PIS1 610 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 PRSS42Q7Z5A4 293 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SYT12Q8IV01 421 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 LILRA3Q8N6C8 439 aaPredicted RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 ZDHHC1Q8WTX9 485 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 UNKQ9C0B0 810 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 POMT2Q9UKY4 750 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 A0A096LPI6 279 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 OR5K3A6NET4 321 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 PDZK1P1A8MUH7 402 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SCAMP1O15126 338 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 MAP3K13O43283 966 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 MGRN1O60291 552 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SKAP2O75563 359 aaPredicted RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 PIAS2O75928 621 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 ANXA6P08133 673 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 ANKRD34CP0C6C1 535 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 PRDX3P30048 256 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 GCKP35557 465 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SLC19A1P41440 591 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 RPS6KA2Q15349 733 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 TLR1Q15399 786 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 PLA2G4EQ3MJ16 856 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 C14orf28Q4W4Y0 310 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 ZC3H12BQ5HYM0 836 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 SAMD4BQ5PRF9 694 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 GARNL3Q5VVW2 1013 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 KHDRBS2Q5VWX1 349 aaKnown RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 NXNQ6DKJ4 435 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 TRIM48Q8IWZ4 208 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 ARL10Q8N8L6 244 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 LINC01555Q8NAE3 123 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 FNDC5Q8NAU1 212 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 ST13P5Q8NFI4 369 aaPredicted RBP6.89□□□□□ -1.31
NUP43-201ENST00000340413 LCN9Q8WX39 176 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 NCLNQ969V3 563 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 GAL3ST3Q96A11 431 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 RGMAQ96B86 450 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 NLNQ9BYT8 704 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SLC6A16Q9GZN6 736 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SEMA6CQ9H3T2 930 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 SRMSQ9H3Y6 488 aa6.89□□□□□ -1.31
NUP43-201ENST00000340413 AASDHPPTQ9NRN7 309 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms