RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 KIAA1324Q6UXG2 1013 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 MTSS1LQ765P7 747 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SFTPA2Q8IWL1 248 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 FIG4Q92562 907 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 GATA6Q92908 595 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 TSACCQ96A04 125 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 C12orf66Q96MD2 445 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 ZBTB18Q99592 522 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 CCM2LQ9NUG4 571 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 NDRG2Q9UN36 371 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 KLHL20Q9Y2M5 609 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PCDHGA11Q9Y5H2 935 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 MAGED1Q9Y5V3 778 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SLCO1B1Q9Y6L6 691 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 MAP3K13O43283 966 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 UGDHO60701 494 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 ANXA4P09525 319 aaPredicted RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 C1GALT1C1LP0DN25 315 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 NELFEP18615 380 aaKnown RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 HNF4AP41235 474 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PRKCQQ04759 706 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF385BQ569K4 471 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 RUNDC3AQ59EK9 446 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 MED27Q6P2C8 311 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PRMT9Q6P2P2 845 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 NXPE4Q6UWF7 544 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 ENPP6Q6UWR7 440 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PTRH1Q86Y79 214 aaKnown RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 ANKRD53Q8N9V6 530 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 OR4K1Q8NGD4 311 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 OR5K2Q8NHB8 316 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 CHTF18Q8WVB6 975 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 SLC5A11Q8WWX8 675 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 EME1Q96AY2 570 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 SH3KBP1Q96B97 665 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PDXPQ96GD0 296 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 FERD3LQ96RJ6 166 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 DPH2Q9BQC3 489 aaPredicted RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 APOOQ9BUR5 198 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 TMEM121BQ9BXQ6 578 aaPredicted RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 BTBD1Q9H0C5 482 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 SYNPO2LQ9H987 977 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 CCDC177Q9NQR7 707 aaPredicted RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 ASIC5Q9NY37 505 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 EBF1Q9UH73 591 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PLXND1Q9Y4D7 1925 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 TRBV5-3A0A0A0MS03 114 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 IGKV1-8A0A0C4DH67 115 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 A0A0G2JN53 185 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 A0A1B0GTW7 788 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 GNG14A0A1W2PPG7 69 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 A0A1W2PPV9 198 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 DPPA5A6NC42 116 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 WASHC1A8K0Z3 465 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PEX1O43933 1283 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 LCMT2O60294 686 aaKnown RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 CPSF4O95639 269 aaKnown RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 KLK1P06870 262 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PRPH2P23942 346 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 TPMTP51580 245 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 FOXM1Q08050 763 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 RBBP5Q15291 538 aaKnown RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 CAPRIN2Q6IMN6 1127 aaKnown RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 SDE2Q6IQ49 451 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 TMEM154Q6P9G4 183 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 WASH2PQ6VEQ5 465 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 GPR180Q86V85 440 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 HORMAD1Q86X24 394 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 EPHX4Q8IUS5 362 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 FBXO15Q8NCQ5 510 aaPredicted RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 HMGB4Q8WW32 186 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 UCN3Q969E3 161 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 ZUFSPQ96AP4 578 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 RAD51AP1Q96B01 352 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 BMFQ96LC9 184 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 RNF145Q96MT1 663 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 HHIPQ96QV1 700 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 ABCG4Q9H172 646 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 KAT8Q9H7Z6 458 aaKnown RBP7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 DLGAP2Q9P1A6 1054 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 BCAP29Q9UHQ4 241 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 VPS4AQ9UN37 437 aa7.12□□□□□ -1.27
SRFBP1-201ENST00000339397 PLOD2O00469 737 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 KMOO15229 486 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 CAPNS1P04632 268 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ABCB1P08183 1280 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 PRPS2P11908 318 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 COX7A2P14406 83 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 UQCRBP14927 111 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 HOXB9P17482 250 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 HTR1EP28566 365 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 KIR3DL1P43629 444 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 IST1P53990 364 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 EEFSECP57772 596 aaKnown RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 KLC1Q07866 573 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 LAPTM5Q13571 262 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 BLMHQ13867 455 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 E2F2Q14209 437 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 SMU1Q2TAY7 513 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms