RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SDC1P18827 310 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 STK19P49842 368 aaPredicted RBP13.7□□□□□ -0.22
PCDH8-201ENST00000338862 CSRP3P50461 194 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 CDH4P55283 916 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 IL18R1Q13478 541 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 LRRC66Q68CR7 880 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 MSRB3Q8IXL7 192 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 GHDCQ8N2G8 530 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 DPP10Q8N608 796 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 GTF3C2Q8WUA4 911 aaPredicted RBP13.7□□□□□ -0.22
PCDH8-201ENST00000338862 GORASP2Q9H8Y8 452 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 RLIMQ9NVW2 624 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 TMCC3Q9ULS5 477 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 PRLP01236 227 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 IGLV3-25P01717 112 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 CDC42P60953 191 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 TYSND1Q2T9J0 566 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 BCL7AQ4VC05 210 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 SERPINA13PQ6UXR4 307 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 BCDIN3DQ7Z5W3 292 aaKnown RBP13.7□□□□□ -0.22
PCDH8-201ENST00000338862 FKBP10Q96AY3 582 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 BRD9Q9H8M2 597 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 POPDC3Q9HBV1 291 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 NECTIN3Q9NQS3 549 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 THG1LQ9NWX6 298 aaKnown RBP13.7□□□□□ -0.22
PCDH8-201ENST00000338862 COMMD3Q9UBI1 195 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 DOCK3Q8IZD9 2030 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
PCDH8-201ENST00000338862 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 ZNF831Q5JPB2 1677 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 SLC38A8A6NNN8 435 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 PSIP1O75475 530 aaKnown RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 GABARAPO95166 117 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 OR56A5P0C7T3 313 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 JUNBP17275 347 aaPredicted RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 PREPP48147 710 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 GRIK2Q13002 908 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NFATC2Q13469 925 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 TBRG1Q3YBR2 411 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 LEXMQ3ZCV2 418 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 ADNP2Q6IQ32 1131 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 RETSATQ6NUM9 610 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NEK5Q6P3R8 708 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 LYSMD2Q8IV50 215 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NAGSQ8N159 534 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 PAPD5Q8NDF8 572 aaKnown RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NFKBIDQ8NI38 313 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 RHBDF1Q96CC6 855 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 TM9SF3Q9HD45 589 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 IL26Q9NPH9 171 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 TMEFF2Q9UIK5 374 aaPredicted RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 A0A1B0GVM2 712 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 MTMR11A4FU01 709 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NOTOA8MTQ0 251 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NPPAP01160 153 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 PTHP01270 115 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 PTGER1P34995 402 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 SLC16A1P53985 500 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NFE2L1Q14494 772 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 FRG2Q64ET8 278 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 TXNDC8Q6A555 127 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 TMPRSS11AQ6ZMR5 421 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 USP43Q70EL4 1123 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 LSRQ86X29 649 aaPredicted RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 GALNT12Q8IXK2 581 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 ZFP41Q8N8Y5 198 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 GPR150Q8NGU9 434 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 ZNF486Q96H40 463 aaPredicted RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 FRG2BQ96QU4 278 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 COQ3Q9NZJ6 369 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 PCDHB1Q9Y5F3 818 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 COCHO43405 550 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 CYP2A7P20853 494 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 HNF1BP35680 557 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 EXOC3L2Q2M3D2 409 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 SNAP47Q5SQN1 464 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 ZNF57Q68EA5 555 aaPredicted RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 LAIR1Q6GTX8 287 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 SHQ1Q6PI26 577 aaKnown RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 KLHL17Q6TDP4 642 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 NRARPQ7Z6K4 114 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 GPR149Q86SP6 731 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 DPF3Q92784 378 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 OR5M11Q96RB7 305 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 CCM2Q9BSQ5 444 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 SMG9Q9H0W8 520 aaKnown RBP13.69□□□□□ -0.22
PCDH8-201ENST00000338862 KCNH6Q9H252 994 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 SLC32A1Q9H598 525 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 AKIP1Q9NQ31 210 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 DYRK4Q9NR20 520 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 SIRT5Q9NXA8 310 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 ANK1P16157 1881 aa13.69□□□□□ -0.22
PCDH8-201ENST00000338862 MYL12BO14950 172 aa13.68□□□□□ -0.22
PCDH8-201ENST00000338862 ARHGEF9O43307 516 aa13.68□□□□□ -0.22
PCDH8-201ENST00000338862 C9P02748 559 aa13.68□□□□□ -0.22
PCDH8-201ENST00000338862 CA5AP35218 305 aa13.68□□□□□ -0.22
PCDH8-201ENST00000338862 CLCN7P51798 805 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms