RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CHTF18Q8WVB6 975 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ATG4AQ8WYN0 398 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 SIGLEC12Q96PQ1 595 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 SPOCK3Q9BQ16 436 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 VN1R1Q9GZP7 353 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 TAC3Q9UHF0 121 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 EPN1Q9Y6I3 576 aaPredicted RBP10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ASPDHA6ND91 283 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 ARHGEF33A8MVX0 844 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 MIF4GDA9UHW6 222 aaKnown RBP10.86□□□□□ -0.67
CSMD2-202ENST00000338325 MYO1CO00159 1063 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 IPO7O95373 1038 aaKnown RBP10.86□□□□□ -0.67
CSMD2-202ENST00000338325 IFNB1P01574 187 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 EEF1DP29692 281 aaKnown RBP10.86□□□□□ -0.67
CSMD2-202ENST00000338325 RELAQ04206 551 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 TLE4Q04727 773 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 PRDX1Q06830 199 aaKnown RBP10.86□□□□□ -0.67
CSMD2-202ENST00000338325 ARHGAP19Q14CB8 494 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 KRTAP21-3Q3LHN1 58 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 PCID2Q5JVF3 399 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 MFSD4BQ5TF39 518 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 OTUD6BQ8N6M0 293 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 SCMH1Q96GD3 660 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 FRMD6Q96NE9 622 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 CYTH2Q99418 400 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 HES7Q9BYE0 225 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 TSPAN10Q9H1Z9 355 aaPredicted RBP10.86□□□□□ -0.67
CSMD2-202ENST00000338325 KCNK13Q9HB14 408 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 KLHL1Q9NR64 748 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 CHRAC1Q9NRG0 131 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 RAB6BQ9NRW1 208 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 FAM114A2Q9NRY5 505 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 TREX1Q9NSU2 369 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 PACSIN2Q9UNF0 486 aaPredicted RBP10.86□□□□□ -0.67
CSMD2-202ENST00000338325 ZFHX3Q15911 3703 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 NF1P21359 2839 aa10.86□□□□□ -0.67
CSMD2-202ENST00000338325 SOWAHDA6NJG2 315 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 ZNF839A8K0R7 811 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 H0YIG0 161 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 HAT1O14929 419 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 NIPSNAP2O75323 286 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 PSIP1O75475 530 aaKnown RBP10.85□□□□□ -0.67
CSMD2-202ENST00000338325 APRTP07741 180 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 CD46P15529 392 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 ABOP16442 354 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 HSD17B2P37059 387 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 PNLIPRP1P54315 467 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 OR1C1Q15619 314 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 OASLQ15646 514 aaKnown RBP10.85□□□□□ -0.67
CSMD2-202ENST00000338325 MEP1AQ16819 746 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 MINDY4Q4G0A6 757 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 NCCRP1Q6ZVX7 275 aaPredicted RBP10.85□□□□□ -0.67
CSMD2-202ENST00000338325 ADCK2Q7Z695 626 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 CRLF3Q8IUI8 442 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 TMEM178AQ8NBL3 297 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 ACBD4Q8NC06 268 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 OR9A4Q8NGU2 314 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 PHF10Q8WUB8 498 aaKnown RBP10.85□□□□□ -0.67
CSMD2-202ENST00000338325 BIRC8Q96P09 236 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 UTP23Q9BRU9 249 aaKnown RBP10.85□□□□□ -0.67
CSMD2-202ENST00000338325 LACRTQ9GZZ8 138 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 ENKD1Q9H0I2 346 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 MCCC2Q9HCC0 563 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 REXO2Q9Y3B8 237 aaKnown RBP10.85□□□□□ -0.67
CSMD2-202ENST00000338325 SCN3AQ9NY46 2000 aa10.85□□□□□ -0.67
CSMD2-202ENST00000338325 NPIPA5E9PKD4 350 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 H3BMM5 538 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 LIASO43766 372 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 NSA2O95478 260 aaKnown RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 CATP04040 527 aaKnown RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 FMO4P31512 558 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 CD96P40200 585 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 AGTR2P50052 363 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 SESN2P58004 480 aaPredicted RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 CRADDP78560 199 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 ABATP80404 500 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 PTK6Q13882 451 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 EXT1Q16394 746 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 RNF187Q5TA31 235 aaPredicted RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 MEX3BQ6ZN04 569 aaKnown RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 ANKRD37Q7Z713 158 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 PLD3Q8IV08 490 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 SIAH3Q8IW03 269 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 SYCE1Q8N0S2 351 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 GHDCQ8N2G8 530 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 FAM98AQ8NCA5 519 aaKnown RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 RNF214Q8ND24 703 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 PPFIBP2Q8ND30 876 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 M1APQ8TC57 530 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 AGAP11Q8TF27 550 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 LPGAT1Q92604 370 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 FAM136AQ96C01 138 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 PKP4Q99569 1192 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 NPAS2Q99743 824 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 EBNA1BP2Q99848 306 aaKnown RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 FRMD8P1Q9BZ68 369 aaPredicted RBP10.84□□□□□ -0.67
CSMD2-202ENST00000338325 TSPY26PQ9H489 355 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 ANKRD10Q9NXR5 420 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 NPIPA1Q9UND3 350 aa10.84□□□□□ -0.67
CSMD2-202ENST00000338325 HCFC1P51610 2035 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms