RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TMIGD1Q6UXZ0 262 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 MRPL41Q8IXM3 137 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 AKAP1Q92667 903 aaKnown RBP eCLIP11.94□□□□□ -0.52e-27■□□□□ 9.6
FN1-202ENST00000336916 FAM84AQ96KN4 292 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 POLR2J3Q9H1A7 115 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 DAPL1A0PJW8 107 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 M0R129 80 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 PDYNP01213 254 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 MPSTP25325 297 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ABATP80404 500 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 GALNTL5Q7Z4T8 443 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 GID4Q8IVV7 300 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 DIRAS2Q96HU8 199 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 KXD1Q9BQD3 176 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 BHLHE41Q9C0J9 482 aaPredicted RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 PDE10AQ9Y233 779 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 AQP12BA6NM10 295 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 SLC22A1O15245 554 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 AK1P00568 194 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ZNF572Q7Z3I7 529 aaPredicted RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 SLCO6A1Q86UG4 719 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 AQP12AQ8IXF9 295 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 OR5K1Q8NHB7 308 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ATG10Q9H0Y0 220 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 B4DGG1 531 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 IL33O95760 270 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ITGA3P26006 1051 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ZNF84P51523 738 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 SCARB2Q14108 478 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 FAM47BQ8NA70 645 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 CLHC1Q8NHS4 586 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 PLEKHA6Q9Y2H5 1048 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 FTCDNL1E5RQL4 147 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ZNF670-ZNF695F2Z2N8 137 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 PPM1BO75688 479 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 IFNA21P01568 189 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 H1F0P07305 194 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 SLC6A4P31645 630 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 SLC8B1Q6J4K2 584 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 KIAA1161Q6NSJ0 714 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ARMC10Q8N2F6 343 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 TSPEARQ8WU66 669 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 EIF2B4Q9UI10 523 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 CD84Q9UIB8 345 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ZNF432O94892 652 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 EPCAMP16422 314 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 HSD17B7P56937 341 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 MVKQ03426 396 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 CD47Q08722 323 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 DHCR24Q15392 516 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 TMEM35AQ53FP2 167 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 GMEB1Q9Y692 573 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 CAPN5O15484 640 aaPredicted RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 TRAPPC6AO75865 159 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 HEXBP07686 556 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 NANOGNBQ7Z5D8 188 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 IQCF2Q8IXL9 164 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 OR10A6Q8NH74 314 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 KCTD7Q96MP8 289 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 ZCCHC3Q9NUD5 404 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 RPS15AP62244 130 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 FASTKD3Q14CZ7 662 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 SIRPB2Q5JXA9 342 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 GPR107Q5VW38 600 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 ALDH16A1Q8IZ83 802 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 RPL10LQ96L21 214 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 P2RY13Q9BPV8 354 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 MND1Q9BWT6 205 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 KIF26BQ2KJY2 2108 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 CDC7O00311 574 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 CDH1P12830 882 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 KCTD8Q6ZWB6 473 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 KIAA1191Q96A73 305 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 EIF3FO00303 357 aaPredicted RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 ARL6IP5O75915 188 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 RABIFP47224 123 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 TUBA1BP68363 451 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 TUBA4AP68366 448 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 PAFAH1B3Q15102 231 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 PLEKHN1Q494U1 663 aaPredicted RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 TUBA1AQ71U36 451 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 DMAC2Q9NW81 257 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 STOX2Q9P2F5 926 aaPredicted RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 FKBPLQ9UIM3 349 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 L7N2F9 121 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 RPS3AP61247 264 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 VAMP2P63027 116 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 DUOXA1Q1HG43 343 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 SOWAHAQ2M3V2 549 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 GTF2IRD2BQ6EKJ0 949 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 GTF2IRD2Q86UP8 949 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 SPATA6LQ8N4H0 392 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 BMFQ96LC9 184 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 GTPBP2Q9BX10 602 aaKnown RBP11.93□□□□□ -0.5
FN1-202ENST00000336916 SNX10Q9Y5X0 201 aa11.93□□□□□ -0.5
FN1-202ENST00000336916 ARL5AQ9Y689 179 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms