RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CHIT1Q13231 466 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 PRDM8Q9NQV8 689 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 TMEM45AQ9NWC5 275 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 KCTD5Q9NXV2 234 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 CCL27Q9Y4X3 112 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 A8MUA0 341 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 RGS10O43665 173 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 FABP3P05413 133 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 RETP07949 1114 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 SPNP16150 400 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 IDH2P48735 452 aaKnown RBP16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 AP1S1P61966 158 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 SMARCB1Q12824 385 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 RFLNAQ6ZTI6 216 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 NXPE1Q8N323 547 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 ATL1Q8WXF7 558 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 MUL1Q969V5 352 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 CNDP2Q96KP4 475 aaKnown RBP16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 C6orf62Q9GZU0 229 aaPredicted RBP16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 TOR4AQ9NXH8 423 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 STMN3Q9NZ72 180 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 TRPS1Q9UHF7 1281 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 POLHQ9Y253 713 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZNF451Q9Y4E5 1061 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 C12orf71A8MTZ7 269 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 CENPBD1B2RD01 187 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 RFPL2O75678 378 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 MAPK1P28482 360 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 EPHA2P29317 976 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 SERPINA4P29622 427 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 CLDN8P56748 225 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 GALK2Q01415 458 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 INO80DQ53TQ3 878 aaPredicted RBP16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 CPZQ66K79 652 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 ARMC8Q8IUR7 673 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 CCDC28AQ8IWP9 274 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 OR5H6Q8NGV6 325 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 OR52J3Q8NH60 311 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 RPL3LQ92901 407 aaKnown RBP16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZHX1-C8orf76Q96EF9 292 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZIC5Q96T25 663 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 BEX2Q9BXY8 128 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 AP3M1Q9Y2T2 418 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 RWDD3Q9Y3V2 267 aa16.01■□□□□ 0.15
CDC42EP4-201ENST00000335793 A0A096LPI6 279 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 LOC100506127A0A0U1RQW1 187 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 AREL1O15033 823 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 CCNDBP1O95273 360 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 HSMCR30P0CW71 290 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 NSG1P42857 185 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 CYP4F2P78329 520 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 DEFB128Q7Z7B8 93 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 HJURPQ8NCD3 748 aaPredicted RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 GPR156Q8NFN8 814 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 NELL1Q92832 810 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZNF641Q96N77 438 aaPredicted RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 WDR12Q9GZL7 423 aaKnown RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ROGDIQ9GZN7 287 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 INTS6Q9UL03 887 aaKnown RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 PIKFYVEQ9Y2I7 2098 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 B3GALNT1O75752 331 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 OR56A5P0C7T3 313 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 PRPS2P11908 318 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 SDC1P18827 310 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 CD9P21926 228 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ETV3P41162 512 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 GABARAPL2P60520 117 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 SLC14A1Q13336 389 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ATP13A5Q4VNC0 1218 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 GPRC6AQ5T6X5 926 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 CLECL1Q8IZS7 167 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 GPR26Q8NDV2 337 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 UTP15Q8TED0 518 aaKnown RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 FAR1Q8WVX9 515 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 HTATIP2Q9BUP3 242 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 NTMT1Q9BV86 223 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 B3GNT3Q9Y2A9 372 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 IGSF6O95976 241 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 BMP4P12644 408 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 CD36P16671 472 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 TGFBR1P36897 503 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ACSM2AQ08AH3 577 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ABRQ12979 859 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 XKR6Q5GH73 641 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ACSM2BQ68CK6 577 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 TRIM46Q7Z4K8 759 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 B3GNT8Q7Z7M8 397 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 CASD1Q96PB1 797 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 CPPED1Q9BRF8 314 aaPredicted RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 NARFLQ9H6Q4 476 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZDHHC6Q9H6R6 413 aa16■□□□□ 0.15
CDC42EP4-201ENST00000335793 MOV10Q9HCE1 1003 aaKnown RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 RPRD1BQ9NQG5 326 aaKnown RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 TMEFF2Q9UIK5 374 aaPredicted RBP16■□□□□ 0.15
CDC42EP4-201ENST00000335793 PTPRDP23468 1912 aa15.99■□□□□ 0.15
CDC42EP4-201ENST00000335793 GNG14A0A1W2PPG7 69 aa15.99■□□□□ 0.15
CDC42EP4-201ENST00000335793 FAM220BPB1ANY3 271 aa15.99■□□□□ 0.15
CDC42EP4-201ENST00000335793 GTF2E2P29084 291 aaKnown RBP15.99■□□□□ 0.15
CDC42EP4-201ENST00000335793 STK19P49842 368 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP4-201ENST00000335793 DAPP51397 102 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms