RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SPAM1P38567 509 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 B4GALNT1Q00973 533 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 BNIP2Q12982 314 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 PCBP2Q15366 365 aaKnown RBP eCLIP13.47□□□□□ -0.258e-7■■■□□ 18.7
SF1-202ENST00000334944 RGL4Q8IZJ4 473 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 OR10A6Q8NH74 314 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 FBXO30Q8TB52 745 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 MCOLN3Q8TDD5 553 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 RHBDF1Q96CC6 855 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 FYTTD1Q96QD9 318 aaKnown RBP13.47□□□□□ -0.25
SF1-202ENST00000334944 RNF167Q9H6Y7 350 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.47□□□□□ -0.25
SF1-202ENST00000334944 TCRBV5S2A0A599 114 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 H3BUI4 141 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 LEFTY2O00292 366 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 SLC1A7O00341 560 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 ITPKAP23677 461 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 DGKAP23743 735 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 SERPINA4P29622 427 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 TUBA1BP68363 451 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 POU6F2P78424 691 aaPredicted RBP13.46□□□□□ -0.25
SF1-202ENST00000334944 PTSQ03393 145 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 KCNAB2Q13303 367 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 DAG1Q14118 895 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 LAPTM4AQ15012 233 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 SUSD1Q6UWL2 747 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 TUBA1AQ71U36 451 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 FRS2Q8WU20 508 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 ATG10Q9H0Y0 220 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 LINC00597Q9H2U6 94 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 FAM118AQ9NWS6 357 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 GFRA2O00451 464 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 ULK1O75385 1050 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 LRG1P02750 347 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 C8AP07357 584 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 EFL1Q7Z2Z2 1120 aaKnown RBP13.46□□□□□ -0.25
SF1-202ENST00000334944 ZNF438Q7Z4V0 828 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 CCDC28AQ8IWP9 274 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 MICU2Q8IYU8 434 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 VOPP1Q96AW1 172 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 LGALS12Q96DT0 336 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 CD244Q9BZW8 370 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 ACTR8Q9H981 624 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 CARS2Q9HA77 564 aaKnown RBP13.46□□□□□ -0.25
SF1-202ENST00000334944 TNPO3Q9Y5L0 923 aaKnown RBP13.46□□□□□ -0.25
SF1-202ENST00000334944 HCFC2Q9Y5Z7 792 aa13.46□□□□□ -0.25
SF1-202ENST00000334944 ANKRD28O15084 1053 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 SLC22A1O15245 554 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 CYP7B1O75881 506 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 TSPAN9O75954 239 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 ALPLP05186 524 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 EFNA1P20827 205 aaPredicted RBP13.45□□□□□ -0.26
SF1-202ENST00000334944 AKT1P31749 480 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 RPIAP49247 311 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 IL5RAQ01344 420 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 EMX2Q04743 252 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 SF1Q15637 639 aaKnown RBP13.45□□□□□ -0.26
SF1-202ENST00000334944 SMN1Q16637 294 aaKnown RBP13.45□□□□□ -0.26
SF1-202ENST00000334944 ZNF783Q6ZMS7 281 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 C10orf111Q8N326 155 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 CYB5D2Q8WUJ1 264 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 HDAC2Q92769 488 aaKnown RBP13.45□□□□□ -0.26
SF1-202ENST00000334944 TSSK3Q96PN8 268 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 DHRS9Q9BPW9 319 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 ZIM2Q9NZV7 527 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 FBXO10Q9UK96 956 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 OR2AG2A6NM03 316 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 ZW10O43264 779 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 CCDC159P0C7I6 412 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 MADCAM1Q13477 382 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 TBRG1Q3YBR2 411 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 RBM48Q5RL73 367 aaKnown RBP13.45□□□□□ -0.26
SF1-202ENST00000334944 ENPP6Q6UWR7 440 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 GALNT5Q7Z7M9 940 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 PIK3C3Q8NEB9 887 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 NSMCE2Q96MF7 247 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 LRRC3Q9BY71 257 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 RUBCNLQ9H714 662 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 PAK6Q9NQU5 681 aaPredicted RBP13.45□□□□□ -0.26
SF1-202ENST00000334944 FBXL12Q9NXK8 326 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 DLGAP4Q9Y2H0 992 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 CCL27Q9Y4X3 112 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 OARD1Q9Y530 152 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 TACR1P25103 407 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 SNRPD2P62316 118 aaKnown RBP13.45□□□□□ -0.26
SF1-202ENST00000334944 ZNF697Q5TEC3 545 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 SLX4IPQ5VYV7 408 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 CNKSR3Q6P9H4 555 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 SPESP1Q6UW49 350 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 GCNT7Q6ZNI0 430 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 LMNTD1Q8N9Z9 388 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 CDC26Q8NHZ8 85 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 BDH2Q9BUT1 245 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 RETREG1Q9H6L5 497 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 STMN3Q9NZ72 180 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 B4GALT6Q9UBX8 382 aa13.45□□□□□ -0.26
SF1-202ENST00000334944 CHD9Q3L8U1 2897 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 H0YAE9 185 aa13.44□□□□□ -0.26
SF1-202ENST00000334944 UPK1AO00322 258 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms