RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 GPX2P18283 190 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 IMPA1P29218 277 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 RANBP1P43487 201 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 ERVFC1P60507 584 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 VLDLRP98155 873 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 ZNF33BQ06732 778 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 IL18R1Q13478 541 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 HKDC1Q2TB90 917 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 ZNF805Q5CZA5 627 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 DPPA4Q7L190 304 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 CYP4Z1Q86W10 505 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 TBC1D15Q8TC07 691 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 STARD8Q92502 1023 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 FOPNLQ96NB1 174 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 NODALQ96S42 347 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 PKP4Q99569 1192 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 WRAP53Q9BUR4 548 aaKnown RBP17.11■□□□□ 0.33
LRCH3-201ENST00000334859 ASPSCR1Q9BZE9 553 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 TPT1P8Q9HAU6 139 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 KIF17Q9P2E2 1029 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 BTBD3Q9Y2F9 522 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 HCFC2Q9Y5Z7 792 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 GNG14A0A1W2PPG7 69 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 XPNPEP2O43895 674 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 MOSPD3O75425 235 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 PDHA2P29803 388 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 PRLHRP49683 370 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 GRIN2CQ14957 1233 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 ZC3H12BQ5HYM0 836 aaKnown RBP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 CPTPQ5TA50 214 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 GTF2IRD2BQ6EKJ0 949 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 TMPRSS11BQ86T26 416 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 GTF2IRD2Q86UP8 949 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 ABTB1Q969K4 478 aaPredicted RBP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 TPD52L3Q96J77 140 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 CCM2Q9BSQ5 444 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 PAK1IP1Q9NWT1 392 aaPredicted RBP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 TBC1D14Q9P2M4 693 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 FBXO10Q9UK96 956 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 SAMHD1Q9Y3Z3 626 aaKnown RBP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 MYO7AQ13402 2215 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 TSPAN11A1L157 253 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 TRIM64BA6NI03 449 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 ANGPTL1O95841 491 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 BCL10O95999 233 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 HPCAL1P37235 193 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 MMP12P39900 470 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 NTHL1P78549 312 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 TMEM115Q12893 351 aaPredicted RBP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 ZNF77Q15935 545 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 C1orf53Q5VUE5 145 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 TMEM220Q6QAJ8 160 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 OR7G3Q8NG95 312 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 GABARAPL1Q9H0R8 117 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 PDP1Q9P0J1 537 aaPredicted RBP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 NFKBIL1Q9UBC1 381 aaPredicted RBP17.1■□□□□ 0.33
LRCH3-201ENST00000334859 PCDHB11Q9Y5F2 797 aa17.1■□□□□ 0.33
LRCH3-201ENST00000334859 KPNA3O00505 521 aaPredicted RBP17.09■□□□□ 0.33
LRCH3-201ENST00000334859 NTRK1P04629 796 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 HSD3B1P14060 373 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 PTPN2P17706 415 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 HSD3B2P26439 372 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 AQP1P29972 269 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 RYKP34925 604 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 ASMTP46597 345 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 DAPP51397 102 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
LRCH3-201ENST00000334859 ERAP2Q6P179 960 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 DRAXINQ8NBI3 349 aaPredicted RBP17.09■□□□□ 0.33
LRCH3-201ENST00000334859 SETD9Q8NE22 299 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 FNDC8Q8TC99 324 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 VPS35Q96QK1 796 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 MYOCQ99972 504 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 BRF2Q9HAW0 419 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 SLC5A10A0PJK1 596 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 GABRR3A8MPY1 467 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 TIMP1P01033 207 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 ABCB1P08183 1280 aaPredicted RBP17.09■□□□□ 0.33
LRCH3-201ENST00000334859 NUDT7P0C024 238 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 SYN1P17600 705 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 FMO3P31513 532 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 DNAJA1P31689 397 aaKnown RBP17.09■□□□□ 0.33
LRCH3-201ENST00000334859 RAE1P78406 368 aaKnown RBP17.09■□□□□ 0.33
LRCH3-201ENST00000334859 CDK5R2Q13319 367 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 ANGPTL8Q6UXH0 198 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 LIPIQ6XZB0 460 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 PARS2Q7L3T8 475 aaKnown RBP17.09■□□□□ 0.33
LRCH3-201ENST00000334859 TECPR1Q7Z6L1 1165 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 TRIM74Q86UV6 250 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 SYTL1Q8IYJ3 562 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 VPS37AQ8NEZ2 397 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 ING5Q8WYH8 240 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 NEIL2Q969S2 332 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 MUL1Q969V5 352 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 RHBDL2Q9NX52 303 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms