RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ANKRD54Q6NXT1 300 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 PSD4Q8NDX1 1056 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZBED6CLQ96FA7 236 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TREX2Q9BQ50 279 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TSSK6Q9BXA6 273 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SLC25A51Q9H1U9 297 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SOX17Q9H6I2 414 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 FKBPLQ9UIM3 349 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 A0A1B0GVT2 93 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 MAFKO60675 156 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 IFNA17P01571 189 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 BCHEP06276 602 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 HSD11B1P28845 292 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CMPK1P30085 196 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ALDH3B2P48448 385 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 PDX1P52945 283 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 BEX3Q00994 111 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 HMGCS1Q01581 520 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 LCLAT1Q6UWP7 414 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 MCEMP1Q8IX19 187 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TOP6BLQ8N6T0 577 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 FAM46DQ8NEK8 389 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SLC25A36Q96CQ1 311 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CORO1BQ9BR76 489 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 EIF2B3Q9NR50 452 aaKnown RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TUBG2Q9NRH3 451 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZIM2Q9NZV7 527 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ADAMTS6Q9UKP5 1117 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SNAP29O95721 258 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 C8GP07360 202 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 GKN3PP0CG01 181 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CKMT1AP12532 417 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CLCN7P51798 805 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF674Q2M3X9 581 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ACBD4Q8NC06 268 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 OR14K1Q8NGZ2 314 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TBC1D15Q8TC07 691 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SCGB1C1Q8TD33 95 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 GPR151Q8TDV0 419 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 HMCESQ96FZ2 354 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 GAL3ST4Q96RP7 486 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 RAD9AQ99638 391 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TTTY10Q9BZA0 68 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 KIAA1522Q9P206 1035 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CNTN3Q9P232 1028 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 EXOSC1Q9Y3B2 195 aaKnown RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ERCC6L2Q5T890 1561 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 A0A1B0GV50 99 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF705FA8MVS1 300 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 MEIS2O14770 477 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 MATN3O15232 486 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 GJB1P08034 283 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF705DP0CH99 300 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF705BP0CI00 300 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF16P17020 682 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SMAD3P84022 425 aaKnown RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 DUOXA1Q1HG43 343 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF767PQ75MW2 155 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM126BQ8IUX1 230 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 PHYKPLQ8IUZ5 450 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 THEM6Q8WUY1 208 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ALPK1Q96QP1 1244 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 NRXN1Q9ULB1 1477 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 TRBV23OR9-2A0A075B6M9 112 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 F8W036 122 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 GLUD1P00367 558 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ADH7P40394 386 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 MLLT10P55197 1068 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 SSTP61278 116 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 BLOC1S1P78537 153 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 TARBP2Q15633 366 aaKnown RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PRAMEF19Q5SWL8 479 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 C9orf57Q5W0N0 161 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 DRICH1Q6PGQ1 229 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 LINGO4Q6UY18 593 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 HSDL2Q6YN16 418 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 TEX19Q8NA77 164 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ATAD1Q8NBU5 361 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 OR8D1Q8WZ84 308 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM45AQ9NWC5 275 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ARL5AQ9Y689 179 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 C1orf167Q5SNV9 1468 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 OR6C74A6NCV1 312 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 SLC15A5A6NIM6 579 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 C2orf74A8MZ97 194 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 MUSKO15146 869 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 SIX3O95343 332 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PCCBP05166 539 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 CHRNB2P17787 502 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 RAB3BP20337 219 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 UBE2UQ5VVX9 321 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 LIPKQ5VXJ0 399 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 TCEAL3Q969E4 200 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 P2RX2Q9UBL9 471 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 IQGAP3Q86VI3 1631 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 MADDQ8WXG6 1647 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 A8MT66 165 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms