RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 POLR2IP36954 125 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 HLCSP50747 726 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF33BQ06732 778 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 KCNAB2Q13303 367 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 RAB39AQ14964 217 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 VMACQ2NL98 169 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 CRTC3Q6UUV7 619 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 XKR5Q6UX68 686 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF547Q8IVP9 402 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ZDHHC21Q8IVQ6 265 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ZZZ3Q8IYH5 903 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ALDH16A1Q8IZ83 802 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 PJA1Q8NG27 643 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 OR5K1Q8NHB7 308 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 SGCDQ92629 289 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 DUSP26Q9BV47 211 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ADNPQ9H2P0 1102 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 CXorf21Q9HAI6 301 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 BRF2Q9HAW0 419 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ABCG2Q9UNQ0 655 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 PCDHGA8Q9Y5G5 932 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 GNG14A0A1W2PPG7 69 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 DIRAS1O95057 198 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 GBAP04062 536 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 UBE3AQ05086 875 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 HNRNPA1L2Q32P51 320 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 TRMT11Q7Z4G4 463 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 THAP5Q7Z6K1 395 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 VTCN1Q7Z7D3 282 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ADGRD2Q7Z7M1 963 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 KLHDC8AQ8IYD2 350 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 C8orf59Q8N0T1 100 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 BARD1Q99728 777 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 OCEL1Q9H607 264 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 USE1Q9NZ43 259 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 ATXN10Q9UBB4 475 aa14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 SAMD4AQ9UPU9 718 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-201ENST00000331433 SAP18O00422 153 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 LZTS3O60299 673 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 NUDT7P0C024 238 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 ADRB3P13945 408 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 HSD3B1P14060 373 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 PCSK2P16519 638 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 NPPBP16860 134 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 GPX2P18283 190 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 IL1RNP18510 177 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 HSD3B2P26439 372 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 MEF2AQ02078 507 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 GAB4Q2WGN9 574 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 BCL7AQ4VC05 210 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 FAM78AQ5JUQ0 283 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 CPTPQ5TA50 214 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 TTC23Q5W5X9 447 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 CAPN13Q6MZZ7 669 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 ERI1Q8IV48 349 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 ZNF555Q8NEP9 628 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 CHTF18Q8WVB6 975 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 OR8D1Q8WZ84 308 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 RDH12Q96NR8 316 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 YTHDF1Q9BYJ9 559 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 TPT1P8Q9HAU6 139 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 DEC1Q9P2X7 70 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 PRKAB1Q9Y478 270 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 HEPACAM2A8MVW5 462 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 hCG_2039718K7EN88 272 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 MAGEA2P43356 314 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 HNRNPFP52597 415 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 TPD52P55327 224 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 GTF2H3Q13889 308 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 NFE2L1Q14494 772 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 MEP1AQ16819 746 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 TMEM259Q4ZIN3 620 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 MED27Q6P2C8 311 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 C12orf43Q96C57 262 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 FAM129BQ96TA1 746 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 EXD2Q9NVH0 621 aa14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 TMEFF2Q9UIK5 374 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 PCYT1BQ9Y5K3 369 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-201ENST00000331433 NUP210Q8TEM1 1887 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 EDDM13A0A1B0GTR0 161 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 MGAT4DA6NG13 374 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 TMX2-CTNND1H3BSU7 103 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 MITFO75030 526 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 ZNF8P17098 575 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 PCDH1Q08174 1060 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 ELP6Q0PNE2 266 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 GAB1Q13480 694 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 SLBPQ14493 270 aaKnown RBP eCLIP14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 ZNF234Q14588 700 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 MYBPC3Q14896 1274 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 CTU2Q2VPK5 515 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 GPR107Q5VW38 600 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 CPZQ66K79 652 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 CEP68Q76N32 757 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 GPR155Q7Z3F1 870 aa14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 R3HCC1LQ7Z5L2 792 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-201ENST00000331433 MMAAQ8IVH4 418 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms