RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 LHX5Q9H2C1 402 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 TUBB1Q9H4B7 451 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SCP2D1Q9UJQ7 156 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ATP6V1G2-DDX39BF2Z307 99 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SRCP12931 536 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 PPP4CP60510 307 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 NKX6-1P78426 367 aaPredicted RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 MSANTD2Q6P1R3 559 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CARM1Q86X55 608 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 OR14K1Q8NGZ2 314 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 TSSK3Q96PN8 268 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 NPLQ9BXD5 320 aaPredicted RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 MEGF6O75095 1541 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 FGBP02675 491 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CYP17A1P05093 508 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 HMGN1P05114 100 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 PCCBP05166 539 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 PPM1AP35813 382 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ATP4BP51164 291 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 NDST2P52849 883 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 GTF2BQ00403 316 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ST3GAL4Q11206 333 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 GTF2H2Q13888 395 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CPSF6Q16630 551 aaKnown RBP eCLIP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 RETSATQ6NUM9 610 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 GTF2H2CQ6P1K8 395 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ZNF627Q7L945 461 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 PLD5Q8N7P1 536 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SLAIN1Q8ND83 568 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 MUS81Q96NY9 551 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 OR52B2Q96RD2 323 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CCM2LQ9NUG4 571 aaPredicted RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CLCA3PQ9Y6N3 262 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 A0A1B0GVC2 190 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 TISP43B9A030 160 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 PRSS44E7EML9 344 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 STK16O75716 305 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 MAPK3P27361 379 aaPredicted RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CDH5P33151 784 aaPredicted RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 WASP42768 502 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SNRPD2P62316 118 aaKnown RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 BTN1A1Q13410 526 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 HNRNPDQ14103 355 aaKnown RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 EXOC3L2Q2M3D2 409 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 C6orf141Q5SZD1 244 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 GALNTL5Q7Z4T8 443 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ZNF227Q86WZ6 799 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SPARTQ8N0X7 666 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 OR8D1Q8WZ84 308 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 LURAP1Q96LR2 239 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 PBDC1Q9BVG4 233 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 RTFDC1Q9BY42 306 aaPredicted RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 NOCTQ9UK39 431 aaKnown RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SCN9AQ15858 1988 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 TRAPPC13A5PLN9 417 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CACNB4O00305 520 aaPredicted RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SCGB2A1O75556 95 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SLC5A2P31639 672 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ATP5C1P36542 298 aaKnown RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 KRBOX4Q5JUW0 171 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 SLC22A10Q63ZE4 541 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ATP6V1C2Q8NEY4 427 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 CNIH3Q8TBE1 160 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ALPK1Q96QP1 1244 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 ABCG8Q9H221 673 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 RNF121Q9H920 327 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 THUMPD1Q9NXG2 353 aaKnown RBP5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 MYO18BQ8IUG5 2567 aa5.24□□□□□ -1.57
SDR42E1-201ENST00000328945 FANCMQ8IYD8 2048 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 PRKYO43930 277 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 KIAA0513O60268 411 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 KERAO60938 352 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 RNASEH2AO75792 299 aaKnown RBP5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 S100PP25815 95 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 LRP8Q14114 963 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 KCNJ11Q14654 390 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 AGAP7PQ5VUJ5 663 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 SLC25A25Q6KCM7 469 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 HSDL2Q6YN16 418 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 ADGRA1Q86SQ6 560 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 PARGQ86W56 976 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 TMEM203Q969S6 136 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 LGALS12Q96DT0 336 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 BARD1Q99728 777 aaKnown RBP5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 CDADC1Q9BWV3 514 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 MGAT4CQ9UBM8 478 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 TNFRSF10DQ9UBN6 386 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 ASB4Q9Y574 426 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 BORCS7-ASMTA0A0B4J1R7 106 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 HMX3A6NHT5 357 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 RFPL3O75679 317 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 CLIC3O95833 236 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 PROS1P07225 676 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 GIMD1P0DJR0 217 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 POU2F1P14859 743 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 VAMP1P23763 118 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 CERS1P27544 350 aa5.23□□□□□ -1.57
SDR42E1-201ENST00000328945 SERPINA4P29622 427 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms