RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 KCNC2Q96PR1 638 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 DUSP26Q9BV47 211 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 ASAH2Q9NR71 780 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 PCDHGA10Q9Y5H3 936 aa13.59□□□□□ -0.23
ATP2C1-201ENST00000328560 FUOMA2VDF0 154 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 TMEM247A6NEH6 219 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CLDN25C9JDP6 229 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 VIPP01282 170 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 FPR1P21462 350 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 PCMT1P22061 227 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 RYKP34925 604 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CRATP43155 626 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CTF1Q16619 201 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 SYT16Q17RD7 645 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 ZFP90Q8TF47 636 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 TMEM159Q96B96 161 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 SH3YL1Q96HL8 342 aaPredicted RBP13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 EMILIN2Q9BXX0 1053 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 TMED5Q9Y3A6 229 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 AGAP14A8MT82 685 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 ARHGEF33A8MVX0 844 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 GFRA2O00451 464 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 ETHE1O95571 254 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 LCKP06239 509 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 C8AP07357 584 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CSNK1DP48730 415 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 SRSF11Q05519 484 aaKnown RBP13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 ADPRMQ3LIE5 342 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CPTPQ5TA50 214 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 METTL2BQ6P1Q9 378 aaKnown RBP13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 P2RY8Q86VZ1 359 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 PTOV1Q86YD1 416 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 OR52E4Q8NGH9 312 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 HERC2P3Q9BVR0 1158 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 TBCCD1Q9NVR7 557 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 SIRT5Q9NXA8 310 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 SCN5AQ14524 2016 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CCL16O15467 120 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 TSPAN6O43657 245 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 CXCL14O95715 111 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 OR1E2P47887 323 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 TRPC1P48995 793 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 ST13P50502 369 aaKnown RBP13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 RPP38P78345 283 aaKnown RBP13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 AGTRAPQ6RW13 159 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 SERPINA11Q86U17 422 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 P3H2Q8IVL5 708 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 LYSMD1Q96S90 227 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 HCFC1R1Q9NWW0 138 aa13.58□□□□□ -0.24
ATP2C1-201ENST00000328560 DOCK6Q96HP0 2047 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 ABHD14A-ACY1A0A1B0GW23 586 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 RGS10O43665 173 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 MASP1P48740 699 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 CTSCP53634 463 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 WNT3P56703 355 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 DEFB103AP81534 67 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 CREMQ03060 361 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 GBX1Q14549 363 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 DDX53Q86TM3 631 aaKnown RBP13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 ANKRD13BQ86YJ7 626 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 ERGIC3Q9Y282 383 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 SH3GLB1Q9Y371 365 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 GABRR3A8MPY1 467 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 TGM5O43548 720 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 CCL5P13501 91 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 RRM2P31350 389 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 IDH2P48735 452 aaKnown RBP13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 POLR2LP62875 67 aaKnown RBP13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 CLCA4Q14CN2 919 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 GGTA1PQ4G0N0 100 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 ARSIQ5FYB1 569 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 TMPRSS11BQ86T26 416 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 RAVER1Q8IY67 606 aaKnown RBP13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 SYTL1Q8IYJ3 562 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 HMG20AQ9NP66 347 aa13.57□□□□□ -0.24
ATP2C1-201ENST00000328560 SUV39H1O43463 412 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 SLC16A8O95907 504 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 ADH1AP07327 375 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 ITGAMP11215 1152 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 ACPPP15309 386 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 NUDT6P53370 316 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 AP1S2P56377 157 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 STARD3Q14849 445 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 IER5LQ5T953 404 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 KDM4DQ6B0I6 523 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 PLD3Q8IV08 490 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 NAGSQ8N159 534 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 VPS37AQ8NEZ2 397 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 ALOXE3Q9BYJ1 711 aa13.56□□□□□ -0.24
ATP2C1-201ENST00000328560 LINC00597Q9H2U6 94 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms