RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 KRT6BP04259 564 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 KRT6CP48668 564 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 COQ5Q5HYK3 327 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 C1orf146Q5VVC0 180 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 BNC2Q6ZN30 1099 aaPredicted RBP18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 RIPOR1Q6ZS17 1223 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 THOC6Q86W42 341 aaKnown RBP18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 MINDY1Q8N5J2 469 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 FNDC5Q8NAU1 212 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 GPR156Q8NFN8 814 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 OR9I1Q8NGQ6 314 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 OR4K3Q96R72 315 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 SGPP1Q9BX95 441 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 ZIM2Q9NZV7 527 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 MANBAO00462 879 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 HSD17B2P37059 387 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 DIO3P55073 304 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 PLCL1Q15111 1095 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 NR6A1Q15406 480 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 C14orf28Q4W4Y0 310 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 SLC35F3Q8IY50 421 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 RAB42Q8N4Z0 105 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 PCYOX1LQ8NBM8 494 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 OR4E2Q8NGC2 313 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 OR2L8Q8NGY9 312 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 ZFPM2Q8WW38 1151 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 STMN2Q93045 179 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 RAB11FIP5Q9BXF6 653 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 CCDC177Q9NQR7 707 aaPredicted RBP18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 NLGN3Q9NZ94 848 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 NDUFAF1Q9Y375 327 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 LNP1A1A4G5 178 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 TRIM38O00635 465 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 PPM1DO15297 605 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 FASLGP48023 281 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 ZNF33BQ06732 778 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 PCDH1Q08174 1060 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 MAD2L1Q13257 205 aaPredicted RBP18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 CAPN13Q6MZZ7 669 aaPredicted RBP18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 TMEM26Q6ZUK4 368 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 AMIGO1Q86WK6 493 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 ROPN1LQ96C74 230 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 ZNF490Q9ULM2 529 aaPredicted RBP18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 SNX6Q9UNH7 406 aa18.06■□□□□ 0.48
EXOSC3-201ENST00000327304 KCNE1BA0A087WTH5 132 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 A0A1W2PPV9 198 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SERTM1A2A2V5 107 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 MRASO14807 208 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 KDM1AO60341 852 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 MYF5P13349 255 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SHMT2P34897 504 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SF3A2Q15428 464 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 AP5B1Q2VPB7 878 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 LIPJQ5W064 366 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 RALGAPA1Q6GYQ0 2036 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 BLOC1S3Q6QNY0 202 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 RBM12BQ8IXT5 1001 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 ARL10Q8N8L6 244 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SMPDL3AQ92484 453 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 CDRT15Q96T59 188 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SRMSQ9H3Y6 488 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 NOP53Q9NZM5 478 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SH2B3Q9UQQ2 575 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 GOLGA4Q13439 2230 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 ZNF839A8K0R7 811 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 FFAR3O14843 346 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 GPR42O15529 346 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SLC22A3O75751 556 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 PDE5AO76074 875 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 PSMG1O95456 288 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 PSMB5P28074 263 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 PEBP1P30086 187 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 PIGGQ5H8A4 983 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 MYLK4Q86YV6 388 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 HPS6Q86YV9 775 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 AVL9Q8NBF6 648 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 OR4C6Q8NH72 309 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 JADE3Q92613 823 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 ACAT2Q9BWD1 397 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 SPHK1Q9NYA1 384 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 POMPQ9Y244 141 aa18.05■□□□□ 0.48
EXOSC3-201ENST00000327304 DYTNA2CJ06 578 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 BTN3A3O00478 584 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 ZNF806P0C7X5 589 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 NPPBP16860 134 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 ATXN3P54252 364 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 PSME3P61289 254 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 RCAN2Q14206 197 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 CPSF6Q16630 551 aaKnown RBP eCLIP18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 IMPG1Q17R60 797 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 THEMIS2Q5TEJ8 643 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 PRAMEF13Q5VWM6 474 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 C8orf82Q6P1X6 216 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 ADGRF3Q8IZF5 1079 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 SLC52A3Q9NQ40 469 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 ASIC5Q9NY37 505 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 OR6C2Q9NZP2 312 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 NKX1-2Q9UD57 310 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 TAC3Q9UHF0 121 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms