RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MED27Q6P2C8 311 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 GALNT13Q8IUC8 556 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 GALNT12Q8IXK2 581 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 RAVER1Q8IY67 606 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 TEX26Q8N6G2 289 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SGCDQ92629 289 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF607Q96SK3 696 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 ACOT13Q9NPJ3 140 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 KLHL28Q9NXS3 571 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 PRR23D1E9PI22 279 aaPredicted RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 PCDH7O60245 1069 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 PRR23D2P0DMB1 279 aaPredicted RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 PAICSP22234 425 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 HMGCLP35914 325 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 MANFP55145 182 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SMU1Q2TAY7 513 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 DLEU7Q6UYE1 221 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 NPAS3Q8IXF0 933 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC39A13Q96H72 371 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 FEVQ99581 238 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 BOCQ9BWV1 1114 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC22A4Q9H015 551 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 MS4A12Q9NXJ0 267 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF624Q9P2J8 865 aaPredicted RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC9A8Q9Y2E8 581 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 GPR39O43194 453 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SLITRK5O94991 958 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 OR1E2P47887 323 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SUOXP51687 545 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 ARPC4P59998 168 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 COX10Q12887 443 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 GPR17Q13304 367 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 OXA1LQ15070 435 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 ZDHHC20Q5W0Z9 365 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 CHST9Q7L1S5 443 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 TBC1D19Q8N5T2 526 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 TRNT1Q96Q11 434 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 BBS4Q96RK4 519 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC35A5Q9BS91 424 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 AMBRA1Q9C0C7 1298 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 ZBTB20Q9HC78 741 aaPredicted RBP12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SEMA3GQ9NS98 782 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 SEC14L3Q9UDX4 400 aa12.36□□□□□ -0.43
DNMT3A-202ENST00000321117 UPK3BL1B0FP48 263 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 UPK3BL2E5RIL1 263 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 CCRL2O00421 344 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 CYP4F8P98187 520 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 DDI2Q5TDH0 399 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 KRT78Q8N1N4 520 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 GEMIN6Q8WXD5 167 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC38A2Q96QD8 506 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 MGLLQ99685 303 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 FAM83DQ9H4H8 585 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 IL1RAPQ9NPH3 570 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 GPRC5BQ9NZH0 403 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 A8MV72 311 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC30A4O14863 429 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC28A2O43868 658 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 MRPS14O60783 128 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 UGT2B17O75795 530 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 SULT1C4O75897 302 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 RGRP47804 291 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 CPZQ66K79 652 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 ERAP2Q6P179 960 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 PNCKQ6P2M8 343 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 BEND7Q8N7W2 519 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 TIFAQ96CG3 184 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 MAPKAP1Q9BPZ7 522 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 RNF38Q9H0F5 515 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 LTB4R2Q9NPC1 389 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 OSER1Q9NX31 292 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 DRGXA6NNA5 263 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 KPNA3O00505 521 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 KIAA0513O60268 411 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 NUAK1O60285 661 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 PRMT3O60678 531 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 NR4A2P43354 598 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 POM121L1PQ3SYA9 428 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 LRRC73Q5JTD7 316 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 LCN1P1Q5VSP4 162 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 DSG4Q86SJ6 1040 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 SERINC5Q86VE9 423 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 CADM3Q8N126 398 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 AQP11Q8NBQ7 271 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 NUDT8Q8WV74 236 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 KLHL6Q8WZ60 621 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 TRIB3Q96RU7 358 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 DOHHQ9BU89 302 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 ACAT2Q9BWD1 397 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 ASPNQ9BXN1 380 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 CCDC177Q9NQR7 707 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms