RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 COPG1Q9Y678 874 aaKnown RBP16.88■□□□□ 0.29
TPM1-203ENST00000317516 SNRNP200O75643 2136 aaKnown RBP16.88■□□□□ 0.29
TPM1-203ENST00000317516 TNRC6AQ8NDV7 1962 aaKnown RBP16.88■□□□□ 0.29
TPM1-203ENST00000317516 A0A0A6YYC8 382 aaPredicted RBP16.87■□□□□ 0.29
TPM1-203ENST00000317516 NSG1A0A0A6YYJ2 146 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 IDSB3KWA1 339 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 I3L1I5 382 aaPredicted RBP16.87■□□□□ 0.29
TPM1-203ENST00000317516 NDC80O14777 642 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 ALOX12BO75342 701 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 FDXRP22570 491 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 CDKN2DP55273 166 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 TIAL1Q01085 375 aaKnown RBP eCLIP16.87■□□□□ 0.29
TPM1-203ENST00000317516 NAE1Q13564 534 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 HIF1AQ16665 826 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 RBM20Q5T481 1227 aaKnown RBP16.87■□□□□ 0.29
TPM1-203ENST00000317516 CAPN13Q6MZZ7 669 aaPredicted RBP16.87■□□□□ 0.29
TPM1-203ENST00000317516 IGFL2Q6UWQ7 119 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 ISLR2Q6UXK2 745 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 LAPTM4BQ86VI4 370 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 PLD3Q8IV08 490 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 IGDCC3Q8IVU1 814 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 KBTBD2Q8IY47 623 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 GPATCH11Q8N954 259 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 DNAJB14Q8TBM8 379 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 ALKBH8Q96BT7 664 aaKnown RBP16.87■□□□□ 0.29
TPM1-203ENST00000317516 CFAP36Q96G28 342 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 HAUS8Q9BT25 410 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 ATG10Q9H0Y0 220 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 ZBTB20Q9HC78 741 aaPredicted RBP16.87■□□□□ 0.29
TPM1-203ENST00000317516 ZNF160Q9HCG1 818 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 AGPAT4Q9NRZ5 378 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 ADAMTS6Q9UKP5 1117 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 FER1L5A0AVI2 2057 aa16.87■□□□□ 0.29
TPM1-203ENST00000317516 PTPN13Q12923 2485 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 H0YIG0 161 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 FOXS1O43638 330 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 GP1BBP13224 206 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 AP1S2P56377 157 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 AP2B1P63010 937 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 FRG1Q14331 258 aaKnown RBP16.86■□□□□ 0.29
TPM1-203ENST00000317516 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
TPM1-203ENST00000317516 HECTD2Q5U5R9 776 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 FAM45BPQ6NSW5 357 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 HIBCHQ6NVY1 386 aaPredicted RBP16.86■□□□□ 0.29
TPM1-203ENST00000317516 SPNS2Q8IVW8 549 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 ARHGEF39Q8N4T4 335 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 AMER3Q8N944 861 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 CAMKVQ8NCB2 501 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 FAM45AQ8TCE6 357 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 ATL1Q8WXF7 558 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 C8orf44Q96CB5 159 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 C19orf60Q96EN9 201 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 SNF8Q96H20 258 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 ASF1BQ9NVP2 202 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 ARL15Q9NXU5 204 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 CHMP2BQ9UQN3 213 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 TEX264Q9Y6I9 313 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 PCSK5Q92824 1860 aa16.86■□□□□ 0.29
TPM1-203ENST00000317516 USP27XA6NNY8 438 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 ICAM2P13598 275 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 ITGA8P53708 1063 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 CSNK1G2P78368 415 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 ELOAQ14241 798 aaKnown RBP16.85■□□□□ 0.29
TPM1-203ENST00000317516 TLR1Q15399 786 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 EIF2S3LQ2VIR3 472 aaKnown RBP16.85■□□□□ 0.29
TPM1-203ENST00000317516 DUPD1Q68J44 220 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 LCTLQ6UWM7 567 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 CUZD1Q86UP6 607 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 TBC1D19Q8N5T2 526 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 PRR7Q8TB68 274 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 METTL21AQ8WXB1 218 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 PSMG3-AS1Q96PY0 264 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 SGPP1Q9BX95 441 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 SYNPO2LQ9H987 977 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 RIC8BQ9NVN3 520 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 MKL2Q9ULH7 1088 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 PCDHGA10Q9Y5H3 936 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 ANKRD12Q6UB98 2062 aa16.85■□□□□ 0.29
TPM1-203ENST00000317516 DOPEY2Q9Y3R5 2298 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 A0A1W2PQ72 361 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 BLACEA4D250 179 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 P2RX6O15547 441 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 TTI1O43156 1089 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 SEC31AO94979 1220 aaKnown RBP16.84■□□□□ 0.29
TPM1-203ENST00000317516 NSA2O95478 260 aaKnown RBP16.84■□□□□ 0.29
TPM1-203ENST00000317516 SERPINA7P05543 415 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 UQCRHP07919 91 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 CYC1P08574 325 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 ENO2P09104 434 aaPredicted RBP16.84■□□□□ 0.29
TPM1-203ENST00000317516 NPPBP16860 134 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 Q0VFX4 171 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 ILF2Q12905 390 aaKnown RBP16.84■□□□□ 0.29
TPM1-203ENST00000317516 MFAP5Q13361 173 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 PHKG1Q16816 387 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 CRB2Q5IJ48 1285 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 B3GNTL1Q67FW5 361 aaPredicted RBP16.84■□□□□ 0.29
TPM1-203ENST00000317516 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 FAAH2Q6GMR7 532 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 RIPOR1Q6ZS17 1223 aa16.84■□□□□ 0.29
TPM1-203ENST00000317516 BBOF1Q8ND07 529 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms