RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RPA4Q13156 261 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ASAH1Q13510 395 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 FGFBP1Q14512 234 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 TATDN3Q17R31 274 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 EIF2S3LQ2VIR3 472 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 TEX30Q5JUR7 227 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 MAP1SQ66K74 1059 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 IL31Q6EBC2 164 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 JADE1Q6IE81 842 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 BHLHB9Q6PI77 547 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 GPR155Q7Z3F1 870 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CARFQ8N187 725 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 TMEM86AQ8N2M4 240 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 LIX1Q8N485 282 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF555Q8NEP9 628 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 MYLPFQ96A32 169 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 TMEM143Q96AN5 459 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 TSPAN17Q96FV3 270 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 DPCDQ9BVM2 203 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 GATA5Q9BWX5 397 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SLAMF7Q9NQ25 335 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 IMPAD1Q9NX62 359 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ERVK-18Q9QC07 812 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 EXTL2Q9UBQ6 330 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 KIF25Q9UIL4 384 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 PURGQ9UJV8 347 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ATXN7L1Q9ULK2 861 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 AAR2Q9Y312 384 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ASB4Q9Y574 426 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ALG5Q9Y673 324 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SERTM1A2A2V5 107 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 GPR37O15354 613 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SLC7A4O43246 635 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 S100A8P05109 93 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 NFICP08651 508 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PRKAR1AP10644 381 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PRG2P13727 222 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CAPN3P20807 821 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MPSTP25325 297 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PTPN3P26045 913 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ARL4AP40617 200 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PIK3CBP42338 1070 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MASP1P48740 699 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CXCR3P49682 368 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RNF144AP50876 292 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CASP6P55212 293 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 EEFSECP57772 596 aaKnown RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ABATP80404 500 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SCN1BQ07699 218 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 GPR17Q13304 367 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ALKBH1Q13686 389 aaKnown RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SSX2Q16385 188 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 GOLGA7BQ2TAP0 167 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 HFEQ30201 348 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 TECRLQ5HYJ1 363 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PCID2Q5JVF3 399 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 AADACL4Q5VUY2 407 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SLC25A25Q6KCM7 469 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 FSTL4Q6MZW2 842 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 C3orf33Q6P1S2 294 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RASSF6Q6ZTQ3 369 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CHMP1BQ7LBR1 199 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CHPFQ8IZ52 775 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PGBD3Q8N328 593 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 COLGALT1Q8NBJ5 622 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 NLGN4YQ8NFZ3 816 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 OR1M1Q8NGA1 313 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CELF6Q96J87 481 aaKnown RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 GSX2Q9BZM3 304 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 BRINP2Q9C0B6 783 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 KATNBL1Q9H079 304 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CRLF2Q9HC73 371 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 FAM118AQ9NWS6 357 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 STAP1Q9ULZ2 295 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 UBQLN1Q9UMX0 589 aaKnown RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ERVW-1Q9UQF0 538 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MIA3Q5JRA6 1907 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 A0A1W2PQ09 198 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MPTX1A8MV57 137 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RTCAO00442 366 aaKnown RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MRASO14807 208 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MYL12BO14950 172 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 XPNPEP2O43895 674 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PAGE1O75459 146 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 LRIG2O94898 1065 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SLC35E2BP0CK96 405 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SLURP2P0DP57 97 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ITGAMP11215 1152 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CKMT1AP12532 417 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PRKAR2AP13861 404 aaKnown RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 EDN3P14138 238 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MYL12AP19105 171 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ITGB8P26012 769 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SPAM1P38567 509 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 FCGRTP55899 365 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RRAS2P62070 204 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MLLT1Q03111 559 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 MVKQ03426 396 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CYP51A1Q16850 503 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms