RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MINDY1Q8N5J2 469 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 OR10H5Q8NGA6 315 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 GPR151Q8TDV0 419 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 TMEM40Q8WWA1 233 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 KLHL6Q8WZ60 621 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 OVCA2Q8WZ82 227 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ISOC1Q96CN7 298 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 CKLFQ9UBR5 152 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 HEBP2Q9Y5Z4 205 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 G3V2L1 256 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 FDXRP22570 491 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 GMFBP60983 142 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 KCNAB2Q13303 367 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ZNF423Q2M1K9 1284 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 TMIGD1Q6UXZ0 262 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 TMEM165Q9HC07 324 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 RIMKLBQ9ULI2 386 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 PMF1-BGLAPU3KQ54 211 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 UBR2Q8IWV8 1755 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ERI3O43414 337 aaKnown RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 GBAP04062 536 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 GATMP50440 423 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 BCAP31P51572 246 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ABATP80404 500 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 CYBRD1Q53TN4 286 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 CLEC12AQ5QGZ9 265 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 HACD2Q6Y1H2 254 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 IQCHQ86VS3 1027 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 FBXO27Q8NI29 283 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 MAPK15Q8TD08 544 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 SMPDL3AQ92484 453 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 GPN1Q9HCN4 374 aaPredicted RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 DNAJC15Q9Y5T4 150 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 DAPL1A0PJW8 107 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ORC5O43913 435 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 RASAL1O95294 804 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 PRAMEF12O95522 483 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 TFPIP10646 304 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ELK4P28324 431 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 CLCNKAP51800 687 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ARFIP1P53367 373 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 PIGGQ5H8A4 983 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 TPRG1LQ5T0D9 272 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 KIAA1161Q6NSJ0 714 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 CGB2Q6NT52 195 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 LRRTM4Q86VH4 590 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 AQP11Q8NBQ7 271 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 HDAC2Q92769 488 aaKnown RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 C5orf34Q96MH7 638 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 KCNH6Q9H252 994 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 DPEP2Q9H4A9 486 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 TDP1Q9NUW8 608 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 PCDHB3Q9Y5E6 796 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 CD68P34810 354 aaPredicted RBP13.37□□□□□ -0.27
SPAST-201ENST00000315285 TUBA1BP68363 451 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 ANKRD26P1Q6NSI1 321 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 PSAPL1Q6NUJ1 521 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 Q6ZVL8 140 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 TUBA1AQ71U36 451 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 TFGQ92734 400 aaPredicted RBP13.37□□□□□ -0.27
SPAST-201ENST00000315285 KCTD7Q96MP8 289 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 DHRS4Q9BTZ2 278 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 SLC28A3Q9HAS3 691 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 INPPL1O15357 1258 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 JUNP05412 331 aaKnown RBP13.37□□□□□ -0.27
SPAST-201ENST00000315285 ADH5P11766 374 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 GSTM3P21266 225 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 DDX6P26196 483 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPAST-201ENST00000315285 PREPP48147 710 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 GRIK2Q13002 908 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 MINDY4Q4G0A6 757 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 ATG9BQ674R7 924 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 ADNP2Q6IQ32 1131 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 TICAM1Q8IUC6 712 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 UCK2Q9BZX2 261 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 CFAP20Q9Y6A4 193 aaKnown RBP13.37□□□□□ -0.27
SPAST-201ENST00000315285 EEDO75530 441 aaKnown RBP13.37□□□□□ -0.27
SPAST-201ENST00000315285 HMGN1P05114 100 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 EDN1P05305 212 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 GALTP07902 379 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 TYRP14679 529 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 ENTPD1P49961 510 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 DGKEP52429 567 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 ADAM17P78536 824 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 PM20D1Q6GTS8 502 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 SLC30A6Q6NXT4 461 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 TSEN15Q8WW01 171 aaKnown RBP13.37□□□□□ -0.27
SPAST-201ENST00000315285 SLC5A11Q8WWX8 675 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 GPR62Q9BZJ7 368 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 CERS4Q9HA82 394 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 PREBQ9HCU5 417 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 MEIS3P2A8K0S8 358 aa13.37□□□□□ -0.27
SPAST-201ENST00000315285 DENRO43583 198 aaKnown RBP13.37□□□□□ -0.27
SPAST-201ENST00000315285 C6orf47O95873 294 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms