RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TEX264Q9Y6I9 313 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 VNN2O95498 520 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MAPK14Q16539 360 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MBLAC2Q68D91 279 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF227Q86WZ6 799 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 RIT1Q92963 219 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 ALPK1Q96QP1 1244 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 AJAP1Q9UKB5 411 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 PCDHGB2Q9Y5G2 931 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MAD2L1BPQ15013 274 aaPredicted RBP13.32□□□□□ -0.28
CLCN6-201ENST00000312413 NCBP2-AS2Q69YL0 99 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 C1orf52Q8N6N3 182 aaKnown RBP13.32□□□□□ -0.28
CLCN6-201ENST00000312413 TMEM145Q8NBT3 493 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 GPR22Q99680 433 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 YIPF4Q9BSR8 244 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ITM2CQ9NQX7 267 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 PCDHAC2Q9Y5I4 1007 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 SLC33A1O00400 549 aaPredicted RBP13.32□□□□□ -0.28
CLCN6-201ENST00000312413 DNAJB5O75953 348 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 DIRAS1O95057 198 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 NFATC1O95644 943 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 CLIC3O95833 236 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 TGFB1P01137 390 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 LMO2P25791 158 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 NRLP54845 237 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 E2F1Q01094 437 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 TIFABQ6ZNK6 161 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 JAGN1Q8N5M9 183 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 YIPF7Q8N8F6 280 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ANKFN1Q8N957 763 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 MSANTD3Q96H12 275 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 CDKN2AIPNLQ96HQ2 116 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF514Q96K75 400 aaPredicted RBP13.32□□□□□ -0.28
CLCN6-201ENST00000312413 PSKH2Q96QS6 385 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 RAB11FIP5Q9BXF6 653 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 MRPS30Q9NP92 439 aaKnown RBP13.32□□□□□ -0.28
CLCN6-201ENST00000312413 CENPMQ9NSP4 180 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ITSN1Q15811 1721 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ARHGAP23Q9P227 1491 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 IGLV3-22A0A075B6J6 115 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 H0YAE9 185 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 HSD17B2P37059 387 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 TAS2R43P59537 309 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 DGKZQ13574 1117 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 DSG2Q14126 1118 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 RAB39AQ14964 217 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 PON3Q15166 354 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 TRAV6A0A075B6T7 132 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF670-ZNF695F2Z2N8 137 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 AHSGP02765 367 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 HLA-DQB2P05538 268 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 HSD3B2P26439 372 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF181Q2M3W8 571 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 CHERPQ8IWX8 916 aaKnown RBP13.32□□□□□ -0.28
CLCN6-201ENST00000312413 PLEKHO2Q8TD55 490 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 TTYH2Q9BSA4 534 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF717Q9BY31 904 aaPredicted RBP13.32□□□□□ -0.28
CLCN6-201ENST00000312413 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 LRRIQ1Q96JM4 1722 aa13.32□□□□□ -0.28
CLCN6-201ENST00000312413 LRRN3E7EW58 273 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 PLD2O14939 933 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 NARSO43776 548 aaKnown RBP13.31□□□□□ -0.28
CLCN6-201ENST00000312413 TFPTP0C1Z6 253 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 HNRNPA0Q13151 305 aaKnown RBP13.31□□□□□ -0.28
CLCN6-201ENST00000312413 SLC44A3Q8N4M1 653 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 NFKBIDQ8NI38 313 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 GRHL3Q8TE85 626 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 LRRN3Q9H3W5 708 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 SRMSQ9H3Y6 488 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 TPT1P8Q9HAU6 139 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 SLC39A1Q9NY26 324 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 PCDHGB5Q9Y5G0 923 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 CDH10Q9Y6N8 788 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 TTC34A8MYJ7 566 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 SYN3O14994 580 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 CH25HO95992 272 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
CLCN6-201ENST00000312413 ARL3P36405 182 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 FNTBP49356 437 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 CCR8P51685 355 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 PGDP52209 483 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 GPR68Q15743 365 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 TMEM236Q5W0B7 351 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 USP50Q70EL3 339 aaPredicted RBP13.31□□□□□ -0.28
CLCN6-201ENST00000312413 FNDC8Q8TC99 324 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 BEX2Q9BXY8 128 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 BEX1Q9HBH7 125 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 FAM120CQ9NX05 1096 aaKnown RBP13.31□□□□□ -0.28
CLCN6-201ENST00000312413 HCN4Q9Y3Q4 1203 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 VNN1O95497 513 aa13.31□□□□□ -0.28
CLCN6-201ENST00000312413 G6PDP11413 515 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms