RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.25□□□□□ -0.93
RBFOX1-201ENST00000311745 RIBC2Q9H4K1 309 aa9.25□□□□□ -0.93
RBFOX1-201ENST00000311745 CRLF2Q9HC73 371 aa9.25□□□□□ -0.93
RBFOX1-201ENST00000311745 CHD9Q3L8U1 2897 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 SLC12A8A0AV02 714 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 NPHS1O60500 1241 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ABCB7O75027 752 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 MTHFD2P13995 350 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 CA5AP35218 305 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 RENBPP51606 427 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 NCS1P62166 190 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 KIF19Q2TAC6 998 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 PARP15Q460N3 678 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ZC3H12BQ5HYM0 836 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 HECTD2Q5U5R9 776 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 MARC1Q5VT66 337 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 CXorf57Q6NSI4 855 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 C8orf82Q6P1X6 216 aaPredicted RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 SUSD1Q6UWL2 747 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 NRARPQ7Z6K4 114 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 TMEM126BQ8IUX1 230 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 MDGA1Q8NFP4 955 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 EXOSC8Q96B26 276 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ELMO2Q96JJ3 720 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 GALPQ9UBC7 116 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ACOT9Q9Y305 439 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 A0A087X1B8 175 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 HEATR9A2RTY3 570 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 A6NCN8 305 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ZNF840PA6NDX5 716 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 TCAF2A6NFQ2 919 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 COCHO43405 550 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 HTR3BO95264 441 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 TMEM11P17152 192 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ERVK-25P63136 954 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 CCNYL2Q5T2Q4 361 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 C16orf54Q6UWD8 224 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 RBM23Q86U06 439 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 SVOPQ8N4V2 548 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 AVL9Q8NBF6 648 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 OR13C4Q8NGS5 318 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 PNPT1Q8TCS8 783 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ATOH1Q92858 354 aaPredicted RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 EID2BQ96D98 161 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 EXOC2Q96KP1 924 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ERVK-6Q9BXR3 956 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 PPIL3Q9H2H8 161 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 TLR8Q9NR97 1041 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 POLE3Q9NRF9 147 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 ERVK-18Q9QC07 812 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 CDY1Q9Y6F8 540 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 C5orf42Q9H799 3197 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 NOTCH4Q99466 2003 aa9.24□□□□□ -0.93
RBFOX1-201ENST00000311745 POM121BA6NF01 834 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 NEMP1O14524 444 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 SLC7A4O43246 635 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 TLR5O60602 858 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 SEC14L2O76054 403 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 ABLIM3O94929 683 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 CCNDBP1O95273 360 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 S100A9P06702 114 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 LTA4HP09960 611 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 SAT1P21673 171 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 TGFBR1P36897 503 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 SKIV2LQ15477 1246 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 GPAT3Q53EU6 434 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 C10orf120Q5SQS8 335 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 NPAS4Q8IUM7 802 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 DHRSXQ8N5I4 330 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 ZNF680Q8NEM1 530 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 ZFAND1Q8TCF1 268 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 SPPL2BQ8TCT7 592 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 KLHL6Q8WZ60 621 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 HDAC10Q969S8 669 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 RCN3Q96D15 328 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 SCLYQ96I15 445 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 CAPNS2Q96L46 248 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 MRPL57Q9BQC6 102 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 TMEM175Q9BSA9 504 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 FSD1LQ9BXM9 530 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 MMP28Q9H239 520 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 ACTR10Q9NZ32 417 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 ZFP37Q9Y6Q3 630 aaPredicted RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 ATG2AQ2TAZ0 1938 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 A0A0U1RQS6 177 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 POM121CA8CG34 1229 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 PPP6CO00743 305 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 UGT2B11O75310 529 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 CYP7B1O75881 506 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 SLC22A5O76082 557 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 HSPA4LO95757 839 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 HDCP19113 662 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 ERP29P30040 261 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 HMGCLP35914 325 aa9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 CDKN1CP49918 316 aaPredicted RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 YBX1P67809 324 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 FLI1Q01543 452 aaPredicted RBP9.23□□□□□ -0.93
RBFOX1-201ENST00000311745 CHAF1BQ13112 559 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms