RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SLC40A1Q9NP59 571 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 COLEC10Q9Y6Z7 277 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 SPAG17Q6Q759 2223 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 TEX15Q9BXT5 2789 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 MAGEB17A8MXT2 336 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 FBP2O00757 339 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ANKRD28O15084 1053 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 LAMTOR5O43504 91 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SEC22BO75396 215 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 THRAP10827 490 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 G6PDP11413 515 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PCNAP12004 261 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 XRCC1P18887 633 aaPredicted RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ITGAXP20702 1163 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 NDUFS1P28331 727 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 IL12AP29459 219 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ACADVLP49748 655 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 RASSF2P50749 326 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 BLKP51451 505 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 STX1BP61266 288 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 UFM1P61960 85 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 UBE2IP63279 158 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SLC25A3Q00325 362 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CSTF3Q12996 717 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CUL3Q13618 768 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 GPR18Q14330 331 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF423Q2M1K9 1284 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SMU1Q2TAY7 513 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PDCD4Q53EL6 469 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ICE2Q659A1 982 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 MED27Q6P2C8 311 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CYP20A1Q6UW02 462 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 VN1R5Q7Z5H4 357 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ADGRF3Q8IZF5 1079 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 RAB42Q8N4Z0 105 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 TMEM105Q8N8V8 129 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ABHD11Q8NFV4 315 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 OR4E2Q8NGC2 313 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SLC37A2Q8TED4 501 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 NUDT8Q8WV74 236 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 LCN9Q8WX39 176 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SH3KBP1Q96B97 665 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 RCN3Q96D15 328 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CMTM7Q96FZ5 175 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 TWSG1Q9GZX9 223 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PCBD2Q9H0N5 130 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PELI2Q9HAT8 420 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SLC52A3Q9NQ40 469 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 C1orf109Q9NX04 203 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ASIC5Q9NY37 505 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 NOP53Q9NZM5 478 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 DLGAP4Q9Y2H0 992 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PCDHGA11Q9Y5H2 935 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CFAP73A6NFT4 308 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 H7BY64 318 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 BTN3A3O00478 584 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 VILLO15195 856 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 BCAT2O15382 392 aaPredicted RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 GYG2O15488 501 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 GSC2O15499 205 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SH3BGRLO75368 114 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 RASSF9O75901 435 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 TBX6O95947 436 aaPredicted RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CHRM5P08912 532 aaPredicted RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 AMD1P17707 334 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CAPN3P20807 821 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 RPS13P62277 151 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 REEP5Q00765 189 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CSTF1Q05048 431 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF33BQ06732 778 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PRDX1Q06830 199 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SF1Q15637 639 aaKnown RBP6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PMS2CLQ68D20 193 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 RIPOR1Q6ZS17 1223 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 LPCAT2Q7L5N7 544 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PACS2Q86VP3 889 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 LONP2Q86WA8 852 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 AMIGO1Q86WK6 493 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 C1orf210Q8IVY1 113 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 LIX1Q8N485 282 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ANKRD53Q8N9V6 530 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 OR4K1Q8NGD4 311 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 FLVCR1-AS1Q8TAF5 88 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PROKR1Q8TCW9 393 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 ZDHHC1Q8WTX9 485 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 FCRL1Q96LA6 429 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PRAP1Q96NZ9 151 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 NPAS2Q99743 824 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 C1orf21Q9H246 121 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 BRF2Q9HAW0 419 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 SLC6A20Q9NP91 592 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 DMRT3Q9NQL9 472 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 POT1Q9NUX5 634 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 MRGBPQ9NV56 204 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 CPNE7Q9UBL6 633 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 PCDHB11Q9Y5F2 797 aa6.69□□□□□ -1.34
PTCD2-201ENST00000308077 FBN2P35556 2912 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 KIR2DS5A0A0G2JLQ3 304 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 A0A0G2JNG1 304 aa6.68□□□□□ -1.34
PTCD2-201ENST00000308077 FEZF1A0PJY2 475 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms